Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF728P0DKX0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF728P0DKX0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF728P0DKX0 AC026471.6-201ENST00000622954 1905 ntBASIC17.8■□□□□ 0.44
ZNF728P0DKX0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
ZNF728P0DKX0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF728P0DKX0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.8■□□□□ 0.44
ZNF728P0DKX0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
ZNF728P0DKX0 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.8■□□□□ 0.44
ZNF728P0DKX0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF728P0DKX0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.79■□□□□ 0.44
ZNF728P0DKX0 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF728P0DKX0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.79■□□□□ 0.44
ZNF728P0DKX0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.79■□□□□ 0.44
ZNF728P0DKX0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ZNF728P0DKX0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF728P0DKX0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.79■□□□□ 0.44
ZNF728P0DKX0 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.79■□□□□ 0.44
ZNF728P0DKX0 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF728P0DKX0 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.79■□□□□ 0.44
ZNF728P0DKX0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.79■□□□□ 0.44
ZNF728P0DKX0 AC105233.4-201ENST00000642045 216 ntBASIC17.79■□□□□ 0.44
ZNF728P0DKX0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF728P0DKX0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF728P0DKX0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.79■□□□□ 0.44
ZNF728P0DKX0 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.79■□□□□ 0.44
ZNF728P0DKX0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF728P0DKX0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.78■□□□□ 0.44
ZNF728P0DKX0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF728P0DKX0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF728P0DKX0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
ZNF728P0DKX0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.78■□□□□ 0.44
ZNF728P0DKX0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF728P0DKX0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
ZNF728P0DKX0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF728P0DKX0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF728P0DKX0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF728P0DKX0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF728P0DKX0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.78■□□□□ 0.44
ZNF728P0DKX0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF728P0DKX0 SMUG1P1-201ENST00000590640 811 ntBASIC17.78■□□□□ 0.44
ZNF728P0DKX0 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF728P0DKX0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF728P0DKX0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ZNF728P0DKX0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF728P0DKX0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ZNF728P0DKX0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF728P0DKX0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.77■□□□□ 0.44
ZNF728P0DKX0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF728P0DKX0 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF728P0DKX0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF728P0DKX0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF728P0DKX0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
ZNF728P0DKX0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.77■□□□□ 0.44
ZNF728P0DKX0 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
ZNF728P0DKX0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
ZNF728P0DKX0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.77■□□□□ 0.44
ZNF728P0DKX0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
ZNF728P0DKX0 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
ZNF728P0DKX0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.76■□□□□ 0.43
ZNF728P0DKX0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.76■□□□□ 0.43
ZNF728P0DKX0 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.76■□□□□ 0.43
ZNF728P0DKX0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF728P0DKX0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.76■□□□□ 0.43
ZNF728P0DKX0 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF728P0DKX0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF728P0DKX0 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF728P0DKX0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
ZNF728P0DKX0 IRS3P-201ENST00000223076 1006 ntBASIC17.76■□□□□ 0.43
ZNF728P0DKX0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF728P0DKX0 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF728P0DKX0 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF728P0DKX0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF728P0DKX0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF728P0DKX0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF728P0DKX0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF728P0DKX0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF728P0DKX0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF728P0DKX0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF728P0DKX0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF728P0DKX0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.76■□□□□ 0.43
ZNF728P0DKX0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
ZNF728P0DKX0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
ZNF728P0DKX0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF728P0DKX0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF728P0DKX0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF728P0DKX0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
ZNF728P0DKX0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.75■□□□□ 0.43
ZNF728P0DKX0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.75■□□□□ 0.43
ZNF728P0DKX0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF728P0DKX0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.75■□□□□ 0.43
ZNF728P0DKX0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.75■□□□□ 0.43
ZNF728P0DKX0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.75■□□□□ 0.43
ZNF728P0DKX0 AL034346.1-201ENST00000568244 1277 ntBASIC17.75■□□□□ 0.43
ZNF728P0DKX0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.75■□□□□ 0.43
ZNF728P0DKX0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.75■□□□□ 0.43
ZNF728P0DKX0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF728P0DKX0 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.75■□□□□ 0.43
ZNF728P0DKX0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF728P0DKX0 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms