Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
HOXC6P09630 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.84■■□□□ 1.41
HOXC6P09630 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
HOXC6P09630 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
HOXC6P09630 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC23.84■■□□□ 1.41
HOXC6P09630 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC23.84■■□□□ 1.41
HOXC6P09630 HLA-B-256ENST00000639848 1089 ntBASIC23.84■■□□□ 1.41
HOXC6P09630 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
HOXC6P09630 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
HOXC6P09630 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
HOXC6P09630 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.83■■□□□ 1.41
HOXC6P09630 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
HOXC6P09630 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HOXC6P09630 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HOXC6P09630 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HOXC6P09630 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC23.83■■□□□ 1.41
HOXC6P09630 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
HOXC6P09630 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
HOXC6P09630 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC23.83■■□□□ 1.41
HOXC6P09630 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.83■■□□□ 1.41
HOXC6P09630 AC060766.5-201ENST00000590539 871 ntBASIC23.83■■□□□ 1.41
HOXC6P09630 CYP2T3P-201ENST00000601990 817 ntBASIC23.83■■□□□ 1.41
HOXC6P09630 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HOXC6P09630 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
HOXC6P09630 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
HOXC6P09630 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
HOXC6P09630 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
HOXC6P09630 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
HOXC6P09630 AL355472.2-201ENST00000422958 438 ntBASIC23.82■■□□□ 1.4
HOXC6P09630 UBE2SP1-201ENST00000450587 669 ntBASIC23.82■■□□□ 1.4
HOXC6P09630 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC23.82■■□□□ 1.4
HOXC6P09630 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC23.82■■□□□ 1.4
HOXC6P09630 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.82■■□□□ 1.4
HOXC6P09630 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
HOXC6P09630 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC23.82■■□□□ 1.4
HOXC6P09630 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
HOXC6P09630 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
HOXC6P09630 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC23.81■■□□□ 1.4
HOXC6P09630 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
HOXC6P09630 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC23.81■■□□□ 1.4
HOXC6P09630 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
HOXC6P09630 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
HOXC6P09630 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
HOXC6P09630 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
HOXC6P09630 AC008550.1-201ENST00000511500 884 ntBASIC23.81■■□□□ 1.4
HOXC6P09630 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
HOXC6P09630 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
HOXC6P09630 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
HOXC6P09630 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC23.81■■□□□ 1.4
HOXC6P09630 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
HOXC6P09630 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.8■■□□□ 1.4
HOXC6P09630 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.8■■□□□ 1.4
HOXC6P09630 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
HOXC6P09630 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.8■■□□□ 1.4
HOXC6P09630 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
HOXC6P09630 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
HOXC6P09630 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
HOXC6P09630 AL359736.2-201ENST00000621992 437 ntBASIC23.8■■□□□ 1.4
HOXC6P09630 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
HOXC6P09630 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
HOXC6P09630 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
HOXC6P09630 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.79■■□□□ 1.4
HOXC6P09630 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HOXC6P09630 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC23.79■■□□□ 1.4
HOXC6P09630 RHOD-202ENST00000532559 538 ntTSL 3 BASIC23.79■■□□□ 1.4
HOXC6P09630 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC23.79■■□□□ 1.4
HOXC6P09630 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC23.79■■□□□ 1.4
HOXC6P09630 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
HOXC6P09630 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.79■■□□□ 1.4
HOXC6P09630 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HOXC6P09630 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.79■■□□□ 1.4
HOXC6P09630 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
HOXC6P09630 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
HOXC6P09630 C9orf163-202ENST00000624034 2573 ntBASIC23.78■■□□□ 1.4
HOXC6P09630 PEX7-202ENST00000367756 680 ntTSL 3 BASIC23.78■■□□□ 1.4
HOXC6P09630 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC23.78■■□□□ 1.4
HOXC6P09630 CDV3P1-201ENST00000471403 739 ntBASIC23.78■■□□□ 1.4
HOXC6P09630 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HOXC6P09630 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
HOXC6P09630 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
HOXC6P09630 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC23.78■■□□□ 1.4
HOXC6P09630 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC23.78■■□□□ 1.4
HOXC6P09630 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
HOXC6P09630 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
HOXC6P09630 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HOXC6P09630 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.77■■□□□ 1.4
HOXC6P09630 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.77■■□□□ 1.4
HOXC6P09630 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
HOXC6P09630 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HOXC6P09630 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
HOXC6P09630 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
HOXC6P09630 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HOXC6P09630 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC23.77■■□□□ 1.4
HOXC6P09630 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC23.77■■□□□ 1.4
HOXC6P09630 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
HOXC6P09630 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC23.77■■□□□ 1.4
HOXC6P09630 MME-217ENST00000616757 1315 ntTSL 5 BASIC23.77■■□□□ 1.4
HOXC6P09630 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
HOXC6P09630 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.77■■□□□ 1.4
HOXC6P09630 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms