Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.93■□□□□ 0.62
RAF1P04049 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RAF1P04049 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
RAF1P04049 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
RAF1P04049 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAF1P04049 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAF1P04049 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAF1P04049 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAF1P04049 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RAF1P04049 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAF1P04049 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.92■□□□□ 0.62
RAF1P04049 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.92■□□□□ 0.62
RAF1P04049 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.92■□□□□ 0.62
RAF1P04049 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RAF1P04049 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RAF1P04049 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAF1P04049 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.92■□□□□ 0.62
RAF1P04049 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.92■□□□□ 0.62
RAF1P04049 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RAF1P04049 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
RAF1P04049 AC004687.1-201ENST00000579003 1625 ntBASIC18.92■□□□□ 0.62
RAF1P04049 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.91■□□□□ 0.62
RAF1P04049 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RAF1P04049 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAF1P04049 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
RAF1P04049 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAF1P04049 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAF1P04049 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RAF1P04049 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAF1P04049 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAF1P04049 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.91■□□□□ 0.62
RAF1P04049 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.91■□□□□ 0.62
RAF1P04049 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAF1P04049 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.91■□□□□ 0.62
RAF1P04049 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.91■□□□□ 0.62
RAF1P04049 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.91■□□□□ 0.62
RAF1P04049 BID-214ENST00000617586 542 ntTSL 5 BASIC18.91■□□□□ 0.62
RAF1P04049 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
RAF1P04049 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.91■□□□□ 0.62
RAF1P04049 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RAF1P04049 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RAF1P04049 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RAF1P04049 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.91■□□□□ 0.62
RAF1P04049 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.91■□□□□ 0.62
RAF1P04049 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAF1P04049 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAF1P04049 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAF1P04049 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAF1P04049 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.9■□□□□ 0.62
RAF1P04049 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAF1P04049 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAF1P04049 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAF1P04049 AL391422.3-201ENST00000603791 2761 ntBASIC18.9■□□□□ 0.62
RAF1P04049 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
RAF1P04049 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.9■□□□□ 0.62
RAF1P04049 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAF1P04049 AC006970.2-201ENST00000450065 779 ntBASIC18.9■□□□□ 0.62
RAF1P04049 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.9■□□□□ 0.62
RAF1P04049 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.9■□□□□ 0.62
RAF1P04049 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAF1P04049 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.9■□□□□ 0.62
RAF1P04049 AC104771.1-201ENST00000603335 964 ntBASIC18.9■□□□□ 0.62
RAF1P04049 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAF1P04049 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAF1P04049 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.9■□□□□ 0.62
RAF1P04049 AC005229.4-201ENST00000610085 2198 ntBASIC18.9■□□□□ 0.62
RAF1P04049 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAF1P04049 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAF1P04049 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.9■□□□□ 0.62
RAF1P04049 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAF1P04049 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
RAF1P04049 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAF1P04049 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAF1P04049 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.89■□□□□ 0.62
RAF1P04049 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.89■□□□□ 0.62
RAF1P04049 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.89■□□□□ 0.62
RAF1P04049 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAF1P04049 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RAF1P04049 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAF1P04049 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.89■□□□□ 0.61
RAF1P04049 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.89■□□□□ 0.61
RAF1P04049 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.89■□□□□ 0.61
RAF1P04049 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.89■□□□□ 0.61
RAF1P04049 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.89■□□□□ 0.61
RAF1P04049 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.89■□□□□ 0.61
RAF1P04049 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.89■□□□□ 0.61
RAF1P04049 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.89■□□□□ 0.61
RAF1P04049 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
RAF1P04049 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
RAF1P04049 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAF1P04049 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAF1P04049 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAF1P04049 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAF1P04049 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.88■□□□□ 0.61
RAF1P04049 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.88■□□□□ 0.61
RAF1P04049 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAF1P04049 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.88■□□□□ 0.61
RAF1P04049 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.88■□□□□ 0.61
RAF1P04049 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAF1P04049 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms