Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.1■■□□□ 1.13
RTN3O95197 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RTN3O95197 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTN3O95197 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTN3O95197 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
RTN3O95197 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
RTN3O95197 MIR663A-201ENST00000385250 93 ntBASIC22.1■■□□□ 1.13
RTN3O95197 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTN3O95197 TERF1P5-201ENST00000477545 1207 ntBASIC22.1■■□□□ 1.13
RTN3O95197 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RTN3O95197 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.1■■□□□ 1.13
RTN3O95197 AC061975.6-201ENST00000579045 1553 ntBASIC22.1■■□□□ 1.13
RTN3O95197 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RTN3O95197 AC013268.1-206ENST00000638368 961 ntBASIC22.1■■□□□ 1.13
RTN3O95197 AC112229.1-201ENST00000639295 961 ntBASIC22.1■■□□□ 1.13
RTN3O95197 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RTN3O95197 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTN3O95197 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RTN3O95197 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.1■■□□□ 1.13
RTN3O95197 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RTN3O95197 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RTN3O95197 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTN3O95197 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTN3O95197 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTN3O95197 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
RTN3O95197 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTN3O95197 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
RTN3O95197 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RTN3O95197 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.09■■□□□ 1.13
RTN3O95197 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.09■■□□□ 1.13
RTN3O95197 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTN3O95197 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.09■■□□□ 1.13
RTN3O95197 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTN3O95197 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
RTN3O95197 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RTN3O95197 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RTN3O95197 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.08■■□□□ 1.13
RTN3O95197 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.08■■□□□ 1.13
RTN3O95197 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RTN3O95197 CNN2P6-201ENST00000439038 900 ntBASIC22.08■■□□□ 1.13
RTN3O95197 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.08■■□□□ 1.13
RTN3O95197 AC005181.1-201ENST00000604782 1256 ntBASIC22.08■■□□□ 1.13
RTN3O95197 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.08■■□□□ 1.13
RTN3O95197 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
RTN3O95197 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.12
RTN3O95197 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
RTN3O95197 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
RTN3O95197 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
RTN3O95197 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
RTN3O95197 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RTN3O95197 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.07■■□□□ 1.12
RTN3O95197 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.07■■□□□ 1.12
RTN3O95197 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC22.07■■□□□ 1.12
RTN3O95197 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.07■■□□□ 1.12
RTN3O95197 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RTN3O95197 AL117328.2-201ENST00000624617 1940 ntBASIC22.07■■□□□ 1.12
RTN3O95197 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RTN3O95197 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.06■■□□□ 1.12
RTN3O95197 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RTN3O95197 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
RTN3O95197 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
RTN3O95197 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.06■■□□□ 1.12
RTN3O95197 AC007322.4-201ENST00000509611 723 ntBASIC22.06■■□□□ 1.12
RTN3O95197 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.06■■□□□ 1.12
RTN3O95197 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.06■■□□□ 1.12
RTN3O95197 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC22.06■■□□□ 1.12
RTN3O95197 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RTN3O95197 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RTN3O95197 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RTN3O95197 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RTN3O95197 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RTN3O95197 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RTN3O95197 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.05■■□□□ 1.12
RTN3O95197 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.05■■□□□ 1.12
RTN3O95197 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RTN3O95197 NCF1B-203ENST00000435988 1254 ntBASIC22.05■■□□□ 1.12
RTN3O95197 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RTN3O95197 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
RTN3O95197 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
RTN3O95197 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC22.05■■□□□ 1.12
RTN3O95197 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
RTN3O95197 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
RTN3O95197 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTN3O95197 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.04■■□□□ 1.12
RTN3O95197 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTN3O95197 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTN3O95197 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTN3O95197 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTN3O95197 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTN3O95197 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTN3O95197 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTN3O95197 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.04■■□□□ 1.12
RTN3O95197 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RTN3O95197 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC22.04■■□□□ 1.12
RTN3O95197 HLA-L-209ENST00000420110 1011 ntBASIC22.04■■□□□ 1.12
RTN3O95197 UQCRFS1P1-201ENST00000435169 820 ntBASIC22.04■■□□□ 1.12
RTN3O95197 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.04■■□□□ 1.12
RTN3O95197 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC22.04■■□□□ 1.12
RTN3O95197 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
RTN3O95197 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms