Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ALX3O95076 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.44■□□□□ 0.54
ALX3O95076 DUX4L19-201ENST00000557448 1267 ntBASIC18.44■□□□□ 0.54
ALX3O95076 AL034346.1-201ENST00000568244 1277 ntBASIC18.44■□□□□ 0.54
ALX3O95076 AL512631.2-201ENST00000604634 923 ntBASIC18.44■□□□□ 0.54
ALX3O95076 AC092666.2-201ENST00000613287 246 ntBASIC18.44■□□□□ 0.54
ALX3O95076 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ALX3O95076 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.44■□□□□ 0.54
ALX3O95076 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ALX3O95076 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ALX3O95076 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
ALX3O95076 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.44■□□□□ 0.54
ALX3O95076 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.44■□□□□ 0.54
ALX3O95076 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
ALX3O95076 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ALX3O95076 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ALX3O95076 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.44■□□□□ 0.54
ALX3O95076 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.43■□□□□ 0.54
ALX3O95076 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
ALX3O95076 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ALX3O95076 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ALX3O95076 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
ALX3O95076 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ALX3O95076 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ALX3O95076 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ALX3O95076 MIR638-201ENST00000385237 100 ntBASIC18.43■□□□□ 0.54
ALX3O95076 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.43■□□□□ 0.54
ALX3O95076 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ALX3O95076 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ALX3O95076 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
ALX3O95076 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
ALX3O95076 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ALX3O95076 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ALX3O95076 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ALX3O95076 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
ALX3O95076 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.43■□□□□ 0.54
ALX3O95076 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.43■□□□□ 0.54
ALX3O95076 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ALX3O95076 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ALX3O95076 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
ALX3O95076 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ALX3O95076 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
ALX3O95076 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.42■□□□□ 0.54
ALX3O95076 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ALX3O95076 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.42■□□□□ 0.54
ALX3O95076 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ALX3O95076 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ALX3O95076 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ALX3O95076 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ALX3O95076 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.42■□□□□ 0.54
ALX3O95076 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.42■□□□□ 0.54
ALX3O95076 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.42■□□□□ 0.54
ALX3O95076 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ALX3O95076 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
ALX3O95076 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ALX3O95076 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ALX3O95076 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
ALX3O95076 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
ALX3O95076 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
ALX3O95076 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.42■□□□□ 0.54
ALX3O95076 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ALX3O95076 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
ALX3O95076 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ALX3O95076 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ALX3O95076 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ALX3O95076 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ALX3O95076 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.41■□□□□ 0.54
ALX3O95076 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ALX3O95076 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.41■□□□□ 0.54
ALX3O95076 AP005435.1-201ENST00000529293 1178 ntBASIC18.41■□□□□ 0.54
ALX3O95076 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.41■□□□□ 0.54
ALX3O95076 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
ALX3O95076 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
ALX3O95076 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
ALX3O95076 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.41■□□□□ 0.54
ALX3O95076 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ALX3O95076 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ALX3O95076 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.4■□□□□ 0.54
ALX3O95076 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.4■□□□□ 0.54
ALX3O95076 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ALX3O95076 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ALX3O95076 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ALX3O95076 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.4■□□□□ 0.54
ALX3O95076 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ALX3O95076 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ALX3O95076 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ALX3O95076 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.4■□□□□ 0.54
ALX3O95076 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.4■□□□□ 0.54
ALX3O95076 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.4■□□□□ 0.54
ALX3O95076 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.4■□□□□ 0.54
ALX3O95076 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.4■□□□□ 0.54
ALX3O95076 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.4■□□□□ 0.54
ALX3O95076 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.4■□□□□ 0.54
ALX3O95076 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ALX3O95076 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.4■□□□□ 0.54
ALX3O95076 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ALX3O95076 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.4■□□□□ 0.54
ALX3O95076 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ALX3O95076 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ALX3O95076 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms