Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRCH4O75427 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRCH4O75427 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.83■■□□□ 1.09
LRCH4O75427 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LRCH4O75427 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.83■■□□□ 1.09
LRCH4O75427 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
LRCH4O75427 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRCH4O75427 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.83■■□□□ 1.09
LRCH4O75427 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.83■■□□□ 1.09
LRCH4O75427 AC138907.5-202ENST00000569484 235 ntBASIC21.83■■□□□ 1.09
LRCH4O75427 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRCH4O75427 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.83■■□□□ 1.09
LRCH4O75427 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LRCH4O75427 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.83■■□□□ 1.08
LRCH4O75427 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LRCH4O75427 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LRCH4O75427 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
LRCH4O75427 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
LRCH4O75427 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
LRCH4O75427 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LRCH4O75427 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
LRCH4O75427 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LRCH4O75427 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.82■■□□□ 1.08
LRCH4O75427 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
LRCH4O75427 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
LRCH4O75427 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LRCH4O75427 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LRCH4O75427 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LRCH4O75427 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.82■■□□□ 1.08
LRCH4O75427 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.82■■□□□ 1.08
LRCH4O75427 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.82■■□□□ 1.08
LRCH4O75427 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.82■■□□□ 1.08
LRCH4O75427 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.82■■□□□ 1.08
LRCH4O75427 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.82■■□□□ 1.08
LRCH4O75427 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LRCH4O75427 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LRCH4O75427 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LRCH4O75427 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
LRCH4O75427 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRCH4O75427 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LRCH4O75427 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
LRCH4O75427 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRCH4O75427 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRCH4O75427 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.81■■□□□ 1.08
LRCH4O75427 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LRCH4O75427 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.81■■□□□ 1.08
LRCH4O75427 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRCH4O75427 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
LRCH4O75427 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LRCH4O75427 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRCH4O75427 KRT18P14-201ENST00000534205 1250 ntBASIC21.81■■□□□ 1.08
LRCH4O75427 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRCH4O75427 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRCH4O75427 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
LRCH4O75427 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
LRCH4O75427 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.8■■□□□ 1.08
LRCH4O75427 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LRCH4O75427 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRCH4O75427 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.8■■□□□ 1.08
LRCH4O75427 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
LRCH4O75427 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRCH4O75427 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.8■■□□□ 1.08
LRCH4O75427 AP004607.4-201ENST00000530158 1459 ntBASIC21.8■■□□□ 1.08
LRCH4O75427 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRCH4O75427 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRCH4O75427 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.8■■□□□ 1.08
LRCH4O75427 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.8■■□□□ 1.08
LRCH4O75427 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.8■■□□□ 1.08
LRCH4O75427 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.8■■□□□ 1.08
LRCH4O75427 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.8■■□□□ 1.08
LRCH4O75427 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.8■■□□□ 1.08
LRCH4O75427 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRCH4O75427 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LRCH4O75427 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRCH4O75427 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LRCH4O75427 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
LRCH4O75427 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRCH4O75427 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
LRCH4O75427 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRCH4O75427 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRCH4O75427 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRCH4O75427 AC010141.2-201ENST00000452426 721 ntBASIC21.79■■□□□ 1.08
LRCH4O75427 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.79■■□□□ 1.08
LRCH4O75427 AC104187.1-201ENST00000607510 612 ntBASIC21.79■■□□□ 1.08
LRCH4O75427 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LRCH4O75427 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
LRCH4O75427 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.79■■□□□ 1.08
LRCH4O75427 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRCH4O75427 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRCH4O75427 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LRCH4O75427 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRCH4O75427 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.78■■□□□ 1.08
LRCH4O75427 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LRCH4O75427 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
LRCH4O75427 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRCH4O75427 POU5F1P4-201ENST00000413175 1085 ntBASIC21.78■■□□□ 1.08
LRCH4O75427 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.78■■□□□ 1.08
LRCH4O75427 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LRCH4O75427 AC008175.2-201ENST00000612840 297 ntBASIC21.78■■□□□ 1.08
LRCH4O75427 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms