Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF253O75346 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF253O75346 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC16.23■□□□□ 0.19
ZNF253O75346 MIR3181-201ENST00000578512 73 ntBASIC16.23■□□□□ 0.19
ZNF253O75346 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
ZNF253O75346 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF253O75346 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF253O75346 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC16.23■□□□□ 0.19
ZNF253O75346 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.23■□□□□ 0.19
ZNF253O75346 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF253O75346 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF253O75346 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16.23■□□□□ 0.19
ZNF253O75346 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF253O75346 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF253O75346 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
ZNF253O75346 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF253O75346 LINC01006-201ENST00000333319 2292 ntBASIC16.22■□□□□ 0.19
ZNF253O75346 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF253O75346 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF253O75346 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF253O75346 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF253O75346 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.22■□□□□ 0.19
ZNF253O75346 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC16.22■□□□□ 0.19
ZNF253O75346 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF253O75346 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC16.22■□□□□ 0.19
ZNF253O75346 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF253O75346 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF253O75346 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF253O75346 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.22■□□□□ 0.19
ZNF253O75346 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
ZNF253O75346 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC16.22■□□□□ 0.19
ZNF253O75346 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF253O75346 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF253O75346 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF253O75346 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF253O75346 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF253O75346 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF253O75346 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF253O75346 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF253O75346 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF253O75346 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ZNF253O75346 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
ZNF253O75346 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF253O75346 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.21■□□□□ 0.19
ZNF253O75346 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.21■□□□□ 0.19
ZNF253O75346 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.21■□□□□ 0.19
ZNF253O75346 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF253O75346 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF253O75346 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF253O75346 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.21■□□□□ 0.19
ZNF253O75346 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF253O75346 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF253O75346 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF253O75346 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF253O75346 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ZNF253O75346 SRD5A1P1-201ENST00000442297 786 ntBASIC16.21■□□□□ 0.19
ZNF253O75346 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF253O75346 MIR3621-201ENST00000580529 85 ntBASIC16.21■□□□□ 0.19
ZNF253O75346 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.21■□□□□ 0.19
ZNF253O75346 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF253O75346 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF253O75346 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF253O75346 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.21■□□□□ 0.18
ZNF253O75346 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ZNF253O75346 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.21■□□□□ 0.18
ZNF253O75346 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
ZNF253O75346 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF253O75346 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF253O75346 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF253O75346 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF253O75346 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.2■□□□□ 0.18
ZNF253O75346 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF253O75346 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF253O75346 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.2■□□□□ 0.18
ZNF253O75346 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF253O75346 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF253O75346 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF253O75346 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC16.2■□□□□ 0.18
ZNF253O75346 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF253O75346 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC16.2■□□□□ 0.18
ZNF253O75346 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ZNF253O75346 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC16.2■□□□□ 0.18
ZNF253O75346 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.2■□□□□ 0.18
ZNF253O75346 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF253O75346 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF253O75346 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ZNF253O75346 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ZNF253O75346 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF253O75346 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF253O75346 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF253O75346 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF253O75346 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
ZNF253O75346 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF253O75346 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF253O75346 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ZNF253O75346 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF253O75346 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC16.19■□□□□ 0.18
ZNF253O75346 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF253O75346 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF253O75346 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms