Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.23■□□□□ 0.83
CNOT3O75175 AC016769.1-201ENST00000409132 1010 ntBASIC20.23■□□□□ 0.83
CNOT3O75175 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.23■□□□□ 0.83
CNOT3O75175 AC080038.1-201ENST00000611274 1154 ntBASIC20.23■□□□□ 0.83
CNOT3O75175 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.23■□□□□ 0.83
CNOT3O75175 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CNOT3O75175 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNOT3O75175 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.23■□□□□ 0.83
CNOT3O75175 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNOT3O75175 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.23■□□□□ 0.83
CNOT3O75175 C11orf96-202ENST00000528572 1834 ntBASIC20.23■□□□□ 0.83
CNOT3O75175 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNOT3O75175 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNOT3O75175 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNOT3O75175 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNOT3O75175 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNOT3O75175 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNOT3O75175 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNOT3O75175 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNOT3O75175 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.22■□□□□ 0.83
CNOT3O75175 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CNOT3O75175 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.22■□□□□ 0.83
CNOT3O75175 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.22■□□□□ 0.83
CNOT3O75175 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNOT3O75175 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.22■□□□□ 0.83
CNOT3O75175 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.22■□□□□ 0.83
CNOT3O75175 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.22■□□□□ 0.83
CNOT3O75175 RAP2CP1-201ENST00000605103 478 ntBASIC20.22■□□□□ 0.83
CNOT3O75175 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.22■□□□□ 0.83
CNOT3O75175 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNOT3O75175 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNOT3O75175 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNOT3O75175 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNOT3O75175 AP004607.7-201ENST00000527152 1677 ntBASIC20.22■□□□□ 0.83
CNOT3O75175 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNOT3O75175 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.22■□□□□ 0.83
CNOT3O75175 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNOT3O75175 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CNOT3O75175 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT3O75175 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT3O75175 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
CNOT3O75175 OR7E47P-201ENST00000546390 1422 ntBASIC20.21■□□□□ 0.83
CNOT3O75175 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT3O75175 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CNOT3O75175 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT3O75175 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
CNOT3O75175 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT3O75175 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT3O75175 AC104187.1-201ENST00000607510 612 ntBASIC20.21■□□□□ 0.83
CNOT3O75175 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT3O75175 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CNOT3O75175 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT3O75175 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.21■□□□□ 0.83
CNOT3O75175 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT3O75175 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CNOT3O75175 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CNOT3O75175 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNOT3O75175 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNOT3O75175 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNOT3O75175 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNOT3O75175 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CNOT3O75175 KRT87P-202ENST00000534226 1464 ntBASIC20.2■□□□□ 0.82
CNOT3O75175 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNOT3O75175 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CNOT3O75175 CDCA4P2-201ENST00000441182 718 ntBASIC20.2■□□□□ 0.82
CNOT3O75175 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CNOT3O75175 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CNOT3O75175 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNOT3O75175 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNOT3O75175 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.2■□□□□ 0.82
CNOT3O75175 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNOT3O75175 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT3O75175 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT3O75175 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT3O75175 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT3O75175 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT3O75175 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.19■□□□□ 0.82
CNOT3O75175 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.19■□□□□ 0.82
CNOT3O75175 AC073111.5-205ENST00000641717 521 ntBASIC20.19■□□□□ 0.82
CNOT3O75175 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT3O75175 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT3O75175 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT3O75175 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT3O75175 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CNOT3O75175 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNOT3O75175 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNOT3O75175 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNOT3O75175 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.18■□□□□ 0.82
CNOT3O75175 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNOT3O75175 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.18■□□□□ 0.82
CNOT3O75175 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNOT3O75175 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNOT3O75175 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.18■□□□□ 0.82
CNOT3O75175 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNOT3O75175 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNOT3O75175 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CNOT3O75175 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CNOT3O75175 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CNOT3O75175 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNOT3O75175 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms