Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.09■□□□□ 0.81
LCMT2O60294 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LCMT2O60294 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.09■□□□□ 0.81
LCMT2O60294 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LCMT2O60294 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
LCMT2O60294 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LCMT2O60294 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LCMT2O60294 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LCMT2O60294 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LCMT2O60294 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.08■□□□□ 0.81
LCMT2O60294 FEM1AP4-201ENST00000443167 1987 ntBASIC20.08■□□□□ 0.81
LCMT2O60294 AF106564.1-201ENST00000607058 2553 ntBASIC20.08■□□□□ 0.81
LCMT2O60294 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LCMT2O60294 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LCMT2O60294 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.08■□□□□ 0.81
LCMT2O60294 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
LCMT2O60294 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.08■□□□□ 0.81
LCMT2O60294 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LCMT2O60294 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
LCMT2O60294 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.08■□□□□ 0.81
LCMT2O60294 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.08■□□□□ 0.81
LCMT2O60294 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.08■□□□□ 0.81
LCMT2O60294 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
LCMT2O60294 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.8
LCMT2O60294 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.07■□□□□ 0.8
LCMT2O60294 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LCMT2O60294 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LCMT2O60294 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LCMT2O60294 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.07■□□□□ 0.8
LCMT2O60294 KRT18P20-201ENST00000548986 1279 ntBASIC20.07■□□□□ 0.8
LCMT2O60294 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LCMT2O60294 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LCMT2O60294 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LCMT2O60294 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LCMT2O60294 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LCMT2O60294 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LCMT2O60294 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LCMT2O60294 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LCMT2O60294 CLDN5-201ENST00000403084 2357 ntBASIC20.06■□□□□ 0.8
LCMT2O60294 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LCMT2O60294 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LCMT2O60294 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LCMT2O60294 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LCMT2O60294 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.06■□□□□ 0.8
LCMT2O60294 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LCMT2O60294 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LCMT2O60294 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.06■□□□□ 0.8
LCMT2O60294 AC137761.2-201ENST00000561729 223 ntBASIC20.06■□□□□ 0.8
LCMT2O60294 AC145350.3-201ENST00000569033 163 ntBASIC20.06■□□□□ 0.8
LCMT2O60294 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.06■□□□□ 0.8
LCMT2O60294 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
LCMT2O60294 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
LCMT2O60294 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.06■□□□□ 0.8
LCMT2O60294 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.06■□□□□ 0.8
LCMT2O60294 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.05■□□□□ 0.8
LCMT2O60294 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
LCMT2O60294 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LCMT2O60294 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
LCMT2O60294 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
LCMT2O60294 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LCMT2O60294 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LCMT2O60294 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
LCMT2O60294 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LCMT2O60294 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LCMT2O60294 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.05■□□□□ 0.8
LCMT2O60294 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.05■□□□□ 0.8
LCMT2O60294 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LCMT2O60294 UBE2DNL-204ENST00000602536 740 ntBASIC20.05■□□□□ 0.8
LCMT2O60294 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LCMT2O60294 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LCMT2O60294 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.05■□□□□ 0.8
LCMT2O60294 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.05■□□□□ 0.8
LCMT2O60294 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LCMT2O60294 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LCMT2O60294 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
LCMT2O60294 AL137060.1-201ENST00000618151 2648 ntBASIC20.05■□□□□ 0.8
LCMT2O60294 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
LCMT2O60294 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
LCMT2O60294 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
LCMT2O60294 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LCMT2O60294 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
LCMT2O60294 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.04■□□□□ 0.8
LCMT2O60294 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LCMT2O60294 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LCMT2O60294 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.04■□□□□ 0.8
LCMT2O60294 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.04■□□□□ 0.8
LCMT2O60294 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LCMT2O60294 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.04■□□□□ 0.8
LCMT2O60294 IKBKGP1-201ENST00000612193 1073 ntBASIC20.04■□□□□ 0.8
LCMT2O60294 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.04■□□□□ 0.8
LCMT2O60294 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LCMT2O60294 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LCMT2O60294 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LCMT2O60294 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LCMT2O60294 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LCMT2O60294 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LCMT2O60294 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
LCMT2O60294 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LCMT2O60294 AC005229.4-201ENST00000610085 2198 ntBASIC20.03■□□□□ 0.8
LCMT2O60294 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms