Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SSSCA1O60232 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSSCA1O60232 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SSSCA1O60232 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SSSCA1O60232 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.06■□□□□ 0.32
SSSCA1O60232 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.06■□□□□ 0.32
SSSCA1O60232 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.06■□□□□ 0.32
SSSCA1O60232 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.06■□□□□ 0.32
SSSCA1O60232 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.06■□□□□ 0.32
SSSCA1O60232 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
SSSCA1O60232 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSSCA1O60232 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSSCA1O60232 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSSCA1O60232 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSSCA1O60232 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSSCA1O60232 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSSCA1O60232 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSSCA1O60232 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSSCA1O60232 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SSSCA1O60232 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSSCA1O60232 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.05■□□□□ 0.32
SSSCA1O60232 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.05■□□□□ 0.32
SSSCA1O60232 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSSCA1O60232 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSSCA1O60232 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSSCA1O60232 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSSCA1O60232 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SSSCA1O60232 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.05■□□□□ 0.32
SSSCA1O60232 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSSCA1O60232 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSSCA1O60232 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.05■□□□□ 0.32
SSSCA1O60232 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SSSCA1O60232 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.05■□□□□ 0.32
SSSCA1O60232 AC092028.1-203ENST00000608262 953 ntBASIC17.05■□□□□ 0.32
SSSCA1O60232 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SSSCA1O60232 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSSCA1O60232 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSSCA1O60232 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSSCA1O60232 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SSSCA1O60232 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSSCA1O60232 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
SSSCA1O60232 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSSCA1O60232 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SSSCA1O60232 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSSCA1O60232 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.05■□□□□ 0.32
SSSCA1O60232 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SSSCA1O60232 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.04■□□□□ 0.32
SSSCA1O60232 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSSCA1O60232 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSSCA1O60232 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SSSCA1O60232 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.04■□□□□ 0.32
SSSCA1O60232 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.04■□□□□ 0.32
SSSCA1O60232 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSSCA1O60232 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SSSCA1O60232 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
SSSCA1O60232 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSSCA1O60232 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.04■□□□□ 0.32
SSSCA1O60232 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SSSCA1O60232 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.04■□□□□ 0.32
SSSCA1O60232 AC003102.1-202ENST00000563394 1796 ntBASIC17.04■□□□□ 0.32
SSSCA1O60232 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.04■□□□□ 0.32
SSSCA1O60232 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SSSCA1O60232 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SSSCA1O60232 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSSCA1O60232 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSSCA1O60232 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSSCA1O60232 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.04■□□□□ 0.32
SSSCA1O60232 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSSCA1O60232 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
SSSCA1O60232 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.04■□□□□ 0.32
SSSCA1O60232 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SSSCA1O60232 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSSCA1O60232 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
SSSCA1O60232 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSSCA1O60232 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSSCA1O60232 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSSCA1O60232 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SSSCA1O60232 AC087239.1-201ENST00000622671 572 ntBASIC17.03■□□□□ 0.32
SSSCA1O60232 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.03■□□□□ 0.32
SSSCA1O60232 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSSCA1O60232 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSSCA1O60232 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SSSCA1O60232 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSSCA1O60232 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSSCA1O60232 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSSCA1O60232 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSSCA1O60232 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SSSCA1O60232 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSSCA1O60232 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSSCA1O60232 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SSSCA1O60232 PLK5-205ENST00000642079 1969 ntBASIC17.02■□□□□ 0.32
SSSCA1O60232 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SSSCA1O60232 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SSSCA1O60232 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSSCA1O60232 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSSCA1O60232 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.02■□□□□ 0.32
SSSCA1O60232 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSSCA1O60232 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.02■□□□□ 0.32
SSSCA1O60232 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.02■□□□□ 0.32
SSSCA1O60232 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms