Protein–RNA interactions for Protein: O43657

TSPAN6, Tetraspanin-6, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6O43657 AC068338.2-201ENST00000563278 1430 ntBASIC20.98■□□□□ 0.95
TSPAN6O43657 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
TSPAN6O43657 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TSPAN6O43657 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TSPAN6O43657 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.98■□□□□ 0.95
TSPAN6O43657 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.98■□□□□ 0.95
TSPAN6O43657 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.98■□□□□ 0.95
TSPAN6O43657 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
TSPAN6O43657 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.98■□□□□ 0.95
TSPAN6O43657 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TSPAN6O43657 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TSPAN6O43657 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.97■□□□□ 0.95
TSPAN6O43657 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TSPAN6O43657 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TSPAN6O43657 AF201337.1-201ENST00000520239 748 ntBASIC20.97■□□□□ 0.95
TSPAN6O43657 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.97■□□□□ 0.95
TSPAN6O43657 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TSPAN6O43657 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TSPAN6O43657 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.97■□□□□ 0.95
TSPAN6O43657 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.97■□□□□ 0.95
TSPAN6O43657 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TSPAN6O43657 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TSPAN6O43657 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TSPAN6O43657 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.96■□□□□ 0.95
TSPAN6O43657 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.96■□□□□ 0.95
TSPAN6O43657 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.96■□□□□ 0.95
TSPAN6O43657 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TSPAN6O43657 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TSPAN6O43657 TSPY6P-201ENST00000448518 926 ntBASIC20.96■□□□□ 0.95
TSPAN6O43657 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
TSPAN6O43657 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TSPAN6O43657 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
TSPAN6O43657 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TSPAN6O43657 AC079834.2-201ENST00000609776 1949 ntBASIC20.96■□□□□ 0.95
TSPAN6O43657 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TSPAN6O43657 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TSPAN6O43657 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TSPAN6O43657 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TSPAN6O43657 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TSPAN6O43657 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TSPAN6O43657 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TSPAN6O43657 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TSPAN6O43657 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TSPAN6O43657 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
TSPAN6O43657 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
TSPAN6O43657 AL355802.2-201ENST00000402069 882 ntBASIC20.95■□□□□ 0.94
TSPAN6O43657 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.95■□□□□ 0.94
TSPAN6O43657 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.95■□□□□ 0.94
TSPAN6O43657 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.95■□□□□ 0.94
TSPAN6O43657 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.95■□□□□ 0.94
TSPAN6O43657 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TSPAN6O43657 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TSPAN6O43657 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TSPAN6O43657 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.95■□□□□ 0.94
TSPAN6O43657 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TSPAN6O43657 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TSPAN6O43657 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TSPAN6O43657 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
TSPAN6O43657 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
TSPAN6O43657 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TSPAN6O43657 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TSPAN6O43657 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.94■□□□□ 0.94
TSPAN6O43657 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.94■□□□□ 0.94
TSPAN6O43657 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TSPAN6O43657 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
TSPAN6O43657 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TSPAN6O43657 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.94■□□□□ 0.94
TSPAN6O43657 SLC29A4P1-201ENST00000398760 971 ntBASIC20.94■□□□□ 0.94
TSPAN6O43657 CYP2T1P-201ENST00000432607 1285 ntBASIC20.94■□□□□ 0.94
TSPAN6O43657 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
TSPAN6O43657 AL162412.1-201ENST00000567129 965 ntBASIC20.94■□□□□ 0.94
TSPAN6O43657 OR10C1-204ENST00000622521 1039 ntBASIC20.94■□□□□ 0.94
TSPAN6O43657 AC008694.1-202ENST00000636953 945 ntBASIC20.94■□□□□ 0.94
TSPAN6O43657 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TSPAN6O43657 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TSPAN6O43657 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.94■□□□□ 0.94
TSPAN6O43657 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TSPAN6O43657 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TSPAN6O43657 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TSPAN6O43657 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TSPAN6O43657 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TSPAN6O43657 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TSPAN6O43657 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TSPAN6O43657 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TSPAN6O43657 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.93■□□□□ 0.94
TSPAN6O43657 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.93■□□□□ 0.94
TSPAN6O43657 AC105036.2-201ENST00000569468 176 ntBASIC20.93■□□□□ 0.94
TSPAN6O43657 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
TSPAN6O43657 AC069236.1-201ENST00000604339 616 ntBASIC20.93■□□□□ 0.94
TSPAN6O43657 AL591742.1-201ENST00000604433 565 ntBASIC20.93■□□□□ 0.94
TSPAN6O43657 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
TSPAN6O43657 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.93■□□□□ 0.94
TSPAN6O43657 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TSPAN6O43657 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.93■□□□□ 0.94
TSPAN6O43657 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.92■□□□□ 0.94
TSPAN6O43657 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.92■□□□□ 0.94
TSPAN6O43657 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
TSPAN6O43657 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.92■□□□□ 0.94
TSPAN6O43657 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TSPAN6O43657 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms