Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ATP2A1O14983 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ATP2A1O14983 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ATP2A1O14983 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ATP2A1O14983 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
ATP2A1O14983 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
ATP2A1O14983 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ATP2A1O14983 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC24.06■■□□□ 1.44
ATP2A1O14983 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC24.06■■□□□ 1.44
ATP2A1O14983 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC24.06■■□□□ 1.44
ATP2A1O14983 RHEB-204ENST00000472642 900 ntTSL 3 BASIC24.06■■□□□ 1.44
ATP2A1O14983 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC24.06■■□□□ 1.44
ATP2A1O14983 AC091874.3-201ENST00000512672 1195 ntBASIC24.06■■□□□ 1.44
ATP2A1O14983 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC24.06■■□□□ 1.44
ATP2A1O14983 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ATP2A1O14983 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
ATP2A1O14983 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC24.06■■□□□ 1.44
ATP2A1O14983 FAM99A-202ENST00000538190 1989 ntBASIC24.05■■□□□ 1.44
ATP2A1O14983 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
ATP2A1O14983 POU5F1P3-201ENST00000428824 1078 ntBASIC24.05■■□□□ 1.44
ATP2A1O14983 AC097658.1-201ENST00000475555 843 ntBASIC24.05■■□□□ 1.44
ATP2A1O14983 CASP6-205ENST00000505486 538 ntTSL 4 BASIC24.05■■□□□ 1.44
ATP2A1O14983 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC24.05■■□□□ 1.44
ATP2A1O14983 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC24.05■■□□□ 1.44
ATP2A1O14983 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
ATP2A1O14983 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
ATP2A1O14983 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
ATP2A1O14983 CASK-201ENST00000378154 2494 ntTSL 5 BASIC24.05■■□□□ 1.44
ATP2A1O14983 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC24.05■■□□□ 1.44
ATP2A1O14983 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
ATP2A1O14983 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
ATP2A1O14983 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
ATP2A1O14983 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
ATP2A1O14983 C9orf163-202ENST00000624034 2573 ntBASIC24.04■■□□□ 1.44
ATP2A1O14983 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ATP2A1O14983 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
ATP2A1O14983 NARF-205ENST00000412079 1760 ntTSL 5 BASIC24.04■■□□□ 1.44
ATP2A1O14983 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
ATP2A1O14983 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC24.04■■□□□ 1.44
ATP2A1O14983 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
ATP2A1O14983 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC24.04■■□□□ 1.44
ATP2A1O14983 AC245052.3-201ENST00000450182 901 ntBASIC24.04■■□□□ 1.44
ATP2A1O14983 RNA5SP413-201ENST00000516373 109 ntBASIC24.04■■□□□ 1.44
ATP2A1O14983 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC24.04■■□□□ 1.44
ATP2A1O14983 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
ATP2A1O14983 AC100791.3-201ENST00000617619 330 ntBASIC24.04■■□□□ 1.44
ATP2A1O14983 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ATP2A1O14983 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC24.04■■□□□ 1.44
ATP2A1O14983 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ATP2A1O14983 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
ATP2A1O14983 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC24.04■■□□□ 1.44
ATP2A1O14983 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC24.03■■□□□ 1.44
ATP2A1O14983 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ATP2A1O14983 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC24.03■■□□□ 1.44
ATP2A1O14983 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ATP2A1O14983 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ATP2A1O14983 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC24.03■■□□□ 1.44
ATP2A1O14983 AC068473.5-201ENST00000616428 2072 ntBASIC24.03■■□□□ 1.44
ATP2A1O14983 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
ATP2A1O14983 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
ATP2A1O14983 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
ATP2A1O14983 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ATP2A1O14983 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
ATP2A1O14983 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC24.03■■□□□ 1.44
ATP2A1O14983 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC24.03■■□□□ 1.44
ATP2A1O14983 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC24.03■■□□□ 1.44
ATP2A1O14983 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ATP2A1O14983 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.03■■□□□ 1.44
ATP2A1O14983 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC24.03■■□□□ 1.44
ATP2A1O14983 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC24.03■■□□□ 1.44
ATP2A1O14983 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC24.02■■□□□ 1.44
ATP2A1O14983 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
ATP2A1O14983 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ATP2A1O14983 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
ATP2A1O14983 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
ATP2A1O14983 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ATP2A1O14983 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ATP2A1O14983 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
ATP2A1O14983 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
ATP2A1O14983 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC24.02■■□□□ 1.44
ATP2A1O14983 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
ATP2A1O14983 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC24.02■■□□□ 1.44
ATP2A1O14983 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC24.02■■□□□ 1.44
ATP2A1O14983 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ATP2A1O14983 C11orf96-202ENST00000528572 1834 ntBASIC24.02■■□□□ 1.44
ATP2A1O14983 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
ATP2A1O14983 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC24.02■■□□□ 1.44
ATP2A1O14983 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC24.02■■□□□ 1.44
ATP2A1O14983 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.43
ATP2A1O14983 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC24.02■■□□□ 1.43
ATP2A1O14983 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
ATP2A1O14983 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC24.01■■□□□ 1.43
ATP2A1O14983 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC24.01■■□□□ 1.43
ATP2A1O14983 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC24.01■■□□□ 1.43
ATP2A1O14983 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
ATP2A1O14983 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
ATP2A1O14983 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
ATP2A1O14983 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
ATP2A1O14983 DUSP5P2-201ENST00000426873 1033 ntBASIC24.01■■□□□ 1.43
ATP2A1O14983 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms