Protein–RNA interactions for Protein: O14678

ABCD4, ATP-binding cassette sub-family D member 4, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4O14678 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD4O14678 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD4O14678 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD4O14678 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD4O14678 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD4O14678 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD4O14678 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ABCD4O14678 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD4O14678 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.47■□□□□ 0.55
ABCD4O14678 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.47■□□□□ 0.55
ABCD4O14678 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.47■□□□□ 0.55
ABCD4O14678 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD4O14678 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD4O14678 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ABCD4O14678 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ABCD4O14678 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
ABCD4O14678 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ABCD4O14678 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ABCD4O14678 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
ABCD4O14678 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ABCD4O14678 CDCA4P2-201ENST00000441182 718 ntBASIC18.46■□□□□ 0.55
ABCD4O14678 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.46■□□□□ 0.55
ABCD4O14678 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ABCD4O14678 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ABCD4O14678 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ABCD4O14678 AC011767.1-201ENST00000617410 1153 ntBASIC18.46■□□□□ 0.55
ABCD4O14678 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.46■□□□□ 0.55
ABCD4O14678 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ABCD4O14678 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ABCD4O14678 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
ABCD4O14678 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ABCD4O14678 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
ABCD4O14678 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
ABCD4O14678 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.45■□□□□ 0.54
ABCD4O14678 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ABCD4O14678 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
ABCD4O14678 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ABCD4O14678 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ABCD4O14678 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.45■□□□□ 0.54
ABCD4O14678 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
ABCD4O14678 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.45■□□□□ 0.54
ABCD4O14678 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.45■□□□□ 0.54
ABCD4O14678 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.45■□□□□ 0.54
ABCD4O14678 AP001160.3-201ENST00000601484 763 ntBASIC18.45■□□□□ 0.54
ABCD4O14678 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
ABCD4O14678 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
ABCD4O14678 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
ABCD4O14678 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
ABCD4O14678 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ABCD4O14678 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
ABCD4O14678 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.44■□□□□ 0.54
ABCD4O14678 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ABCD4O14678 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ABCD4O14678 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ABCD4O14678 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
ABCD4O14678 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ABCD4O14678 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ABCD4O14678 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ABCD4O14678 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
ABCD4O14678 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
ABCD4O14678 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.44■□□□□ 0.54
ABCD4O14678 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ABCD4O14678 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ABCD4O14678 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.44■□□□□ 0.54
ABCD4O14678 AC026185.1-201ENST00000445748 174 ntBASIC18.44■□□□□ 0.54
ABCD4O14678 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
ABCD4O14678 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.44■□□□□ 0.54
ABCD4O14678 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ABCD4O14678 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.44■□□□□ 0.54
ABCD4O14678 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
ABCD4O14678 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ABCD4O14678 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.44■□□□□ 0.54
ABCD4O14678 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ABCD4O14678 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ABCD4O14678 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
ABCD4O14678 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ABCD4O14678 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
ABCD4O14678 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ABCD4O14678 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ABCD4O14678 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ABCD4O14678 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ABCD4O14678 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.43■□□□□ 0.54
ABCD4O14678 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.43■□□□□ 0.54
ABCD4O14678 ID1-201ENST00000376105 1233 ntBASIC18.43■□□□□ 0.54
ABCD4O14678 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.43■□□□□ 0.54
ABCD4O14678 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.43■□□□□ 0.54
ABCD4O14678 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.43■□□□□ 0.54
ABCD4O14678 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.43■□□□□ 0.54
ABCD4O14678 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.43■□□□□ 0.54
ABCD4O14678 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.43■□□□□ 0.54
ABCD4O14678 UBE2DNL-204ENST00000602536 740 ntBASIC18.43■□□□□ 0.54
ABCD4O14678 RAP2CP1-201ENST00000605103 478 ntBASIC18.43■□□□□ 0.54
ABCD4O14678 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ABCD4O14678 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ABCD4O14678 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.43■□□□□ 0.54
ABCD4O14678 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.43■□□□□ 0.54
ABCD4O14678 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ABCD4O14678 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.43■□□□□ 0.54
ABCD4O14678 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ABCD4O14678 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms