Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF223E7ERA6 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.43■□□□□ 0.38
RNF223E7ERA6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.43■□□□□ 0.38
RNF223E7ERA6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF223E7ERA6 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.43■□□□□ 0.38
RNF223E7ERA6 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.43■□□□□ 0.38
RNF223E7ERA6 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.43■□□□□ 0.38
RNF223E7ERA6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RNF223E7ERA6 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF223E7ERA6 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RNF223E7ERA6 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RNF223E7ERA6 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF223E7ERA6 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RNF223E7ERA6 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF223E7ERA6 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF223E7ERA6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF223E7ERA6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RNF223E7ERA6 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF223E7ERA6 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.42■□□□□ 0.38
RNF223E7ERA6 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF223E7ERA6 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF223E7ERA6 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF223E7ERA6 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RNF223E7ERA6 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF223E7ERA6 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.42■□□□□ 0.38
RNF223E7ERA6 AC060766.5-201ENST00000590539 871 ntBASIC17.42■□□□□ 0.38
RNF223E7ERA6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RNF223E7ERA6 AC008403.3-201ENST00000598924 454 ntBASIC17.42■□□□□ 0.38
RNF223E7ERA6 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF223E7ERA6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF223E7ERA6 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF223E7ERA6 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF223E7ERA6 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
RNF223E7ERA6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF223E7ERA6 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF223E7ERA6 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF223E7ERA6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF223E7ERA6 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF223E7ERA6 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF223E7ERA6 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF223E7ERA6 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RNF223E7ERA6 MIR718-201ENST00000390190 70 ntBASIC17.41■□□□□ 0.38
RNF223E7ERA6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF223E7ERA6 C1QBPP2-201ENST00000528754 825 ntBASIC17.41■□□□□ 0.38
RNF223E7ERA6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF223E7ERA6 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF223E7ERA6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF223E7ERA6 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF223E7ERA6 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF223E7ERA6 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF223E7ERA6 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF223E7ERA6 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF223E7ERA6 AC087742.1-201ENST00000575880 1738 ntBASIC17.41■□□□□ 0.38
RNF223E7ERA6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF223E7ERA6 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF223E7ERA6 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF223E7ERA6 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RNF223E7ERA6 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF223E7ERA6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.4■□□□□ 0.38
RNF223E7ERA6 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF223E7ERA6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF223E7ERA6 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF223E7ERA6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF223E7ERA6 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
RNF223E7ERA6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF223E7ERA6 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF223E7ERA6 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF223E7ERA6 CYP2T3P-201ENST00000601990 817 ntBASIC17.4■□□□□ 0.38
RNF223E7ERA6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF223E7ERA6 HLA-B-256ENST00000639848 1089 ntBASIC17.4■□□□□ 0.38
RNF223E7ERA6 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF223E7ERA6 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RNF223E7ERA6 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF223E7ERA6 AC139530.1-201ENST00000575312 1977 ntBASIC17.4■□□□□ 0.38
RNF223E7ERA6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF223E7ERA6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF223E7ERA6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RNF223E7ERA6 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
RNF223E7ERA6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF223E7ERA6 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF223E7ERA6 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF223E7ERA6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF223E7ERA6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
RNF223E7ERA6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF223E7ERA6 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.39■□□□□ 0.37
RNF223E7ERA6 CDV3P1-201ENST00000471403 739 ntBASIC17.39■□□□□ 0.37
RNF223E7ERA6 RPPH1-201ENST00000516869 333 ntBASIC17.39■□□□□ 0.37
RNF223E7ERA6 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF223E7ERA6 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF223E7ERA6 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.39■□□□□ 0.37
RNF223E7ERA6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF223E7ERA6 FAM21FP-204ENST00000608637 956 ntBASIC17.39■□□□□ 0.37
RNF223E7ERA6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF223E7ERA6 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF223E7ERA6 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF223E7ERA6 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF223E7ERA6 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF223E7ERA6 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF223E7ERA6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF223E7ERA6 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms