Protein–RNA interactions for Protein: A6NKG5

RTL1, Retrotransposon-like protein 1, humanhuman

Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1A6NKG5 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC28.03■■■□□ 2.08
RTL1A6NKG5 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC28.03■■■□□ 2.08
RTL1A6NKG5 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
RTL1A6NKG5 KRT17P1-201ENST00000399211 1546 ntBASIC28.03■■■□□ 2.08
RTL1A6NKG5 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
RTL1A6NKG5 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC28.02■■■□□ 2.08
RTL1A6NKG5 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
RTL1A6NKG5 AC093827.2-201ENST00000512654 315 ntBASIC28.02■■■□□ 2.08
RTL1A6NKG5 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC28.02■■■□□ 2.08
RTL1A6NKG5 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC28.02■■■□□ 2.08
RTL1A6NKG5 CYP2T3P-201ENST00000601990 817 ntBASIC28.02■■■□□ 2.08
RTL1A6NKG5 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
RTL1A6NKG5 AC068473.5-201ENST00000616428 2072 ntBASIC28.02■■■□□ 2.08
RTL1A6NKG5 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC28.02■■■□□ 2.08
RTL1A6NKG5 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC28.02■■■□□ 2.08
RTL1A6NKG5 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
RTL1A6NKG5 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
RTL1A6NKG5 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
RTL1A6NKG5 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC28.01■■■□□ 2.07
RTL1A6NKG5 DET1-205ENST00000558413 583 ntTSL 4 BASIC28.01■■■□□ 2.07
RTL1A6NKG5 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.07
RTL1A6NKG5 AC010542.4-201ENST00000563151 1910 ntBASIC28.01■■■□□ 2.07
RTL1A6NKG5 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
RTL1A6NKG5 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
RTL1A6NKG5 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
RTL1A6NKG5 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
RTL1A6NKG5 C11orf96-202ENST00000528572 1834 ntBASIC28.01■■■□□ 2.07
RTL1A6NKG5 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
RTL1A6NKG5 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
RTL1A6NKG5 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC28.01■■■□□ 2.07
RTL1A6NKG5 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC28.01■■■□□ 2.07
RTL1A6NKG5 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
RTL1A6NKG5 ME2-208ENST00000638937 2471 ntTSL 5 BASIC28.01■■■□□ 2.07
RTL1A6NKG5 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
RTL1A6NKG5 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC28.01■■■□□ 2.07
RTL1A6NKG5 ESRRAP1-201ENST00000400596 1257 ntBASIC28■■■□□ 2.07
RTL1A6NKG5 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
RTL1A6NKG5 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC28■■■□□ 2.07
RTL1A6NKG5 OR2A1-AS1-201ENST00000462305 773 ntBASIC28■■■□□ 2.07
RTL1A6NKG5 CDV3P1-201ENST00000471403 739 ntBASIC28■■■□□ 2.07
RTL1A6NKG5 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC28■■■□□ 2.07
RTL1A6NKG5 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC28■■■□□ 2.07
RTL1A6NKG5 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
RTL1A6NKG5 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
RTL1A6NKG5 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC28■■■□□ 2.07
RTL1A6NKG5 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC28■■■□□ 2.07
RTL1A6NKG5 C1orf229-201ENST00000623686 2258 ntBASIC28■■■□□ 2.07
RTL1A6NKG5 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
RTL1A6NKG5 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC28■■■□□ 2.07
RTL1A6NKG5 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC28■■■□□ 2.07
RTL1A6NKG5 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC28■■■□□ 2.07
RTL1A6NKG5 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC28■■■□□ 2.07
RTL1A6NKG5 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC27.99■■■□□ 2.07
RTL1A6NKG5 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC27.99■■■□□ 2.07
RTL1A6NKG5 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC27.99■■■□□ 2.07
RTL1A6NKG5 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
RTL1A6NKG5 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC27.99■■■□□ 2.07
RTL1A6NKG5 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC27.99■■■□□ 2.07
RTL1A6NKG5 UNC93B5-201ENST00000530315 699 ntBASIC27.99■■■□□ 2.07
RTL1A6NKG5 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC27.99■■■□□ 2.07
RTL1A6NKG5 C9orf163-202ENST00000624034 2573 ntBASIC27.99■■■□□ 2.07
RTL1A6NKG5 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
RTL1A6NKG5 SAPCD2P1-201ENST00000395413 1184 ntBASIC27.99■■■□□ 2.07
RTL1A6NKG5 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC27.99■■■□□ 2.07
RTL1A6NKG5 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC27.99■■■□□ 2.07
RTL1A6NKG5 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
RTL1A6NKG5 NARF-205ENST00000412079 1760 ntTSL 5 BASIC27.98■■■□□ 2.07
RTL1A6NKG5 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
RTL1A6NKG5 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC27.98■■■□□ 2.07
RTL1A6NKG5 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
RTL1A6NKG5 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
RTL1A6NKG5 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
RTL1A6NKG5 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
RTL1A6NKG5 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC27.98■■■□□ 2.07
RTL1A6NKG5 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC27.98■■■□□ 2.07
RTL1A6NKG5 LSM12P1-201ENST00000411836 588 ntBASIC27.98■■■□□ 2.07
RTL1A6NKG5 PTPA-214ENST00000423100 988 ntTSL 2 BASIC27.98■■■□□ 2.07
RTL1A6NKG5 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC27.98■■■□□ 2.07
RTL1A6NKG5 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC27.98■■■□□ 2.07
RTL1A6NKG5 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
RTL1A6NKG5 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC27.97■■■□□ 2.07
RTL1A6NKG5 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
RTL1A6NKG5 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC27.97■■■□□ 2.07
RTL1A6NKG5 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
RTL1A6NKG5 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC27.97■■■□□ 2.07
RTL1A6NKG5 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC27.97■■■□□ 2.07
RTL1A6NKG5 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
RTL1A6NKG5 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC27.96■■■□□ 2.07
RTL1A6NKG5 STX5-203ENST00000394690 1568 ntTSL 5 BASIC27.96■■■□□ 2.07
RTL1A6NKG5 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
RTL1A6NKG5 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC27.96■■■□□ 2.07
RTL1A6NKG5 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
RTL1A6NKG5 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC27.96■■■□□ 2.07
RTL1A6NKG5 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC27.96■■■□□ 2.07
RTL1A6NKG5 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
RTL1A6NKG5 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC27.96■■■□□ 2.07
RTL1A6NKG5 AL355472.2-201ENST00000422958 438 ntBASIC27.96■■■□□ 2.07
RTL1A6NKG5 GCSHP5-201ENST00000443090 522 ntBASIC27.96■■■□□ 2.07
RTL1A6NKG5 RPS2P52-201ENST00000469610 820 ntBASIC27.96■■■□□ 2.07
RTL1A6NKG5 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms