Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
SBNO1A3KN83 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
SBNO1A3KN83 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
SBNO1A3KN83 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC28.67■■■□□ 2.18
SBNO1A3KN83 RN7SL471P-201ENST00000580476 299 ntBASIC28.67■■■□□ 2.18
SBNO1A3KN83 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SBNO1A3KN83 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SBNO1A3KN83 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SBNO1A3KN83 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC28.67■■■□□ 2.18
SBNO1A3KN83 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
SBNO1A3KN83 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SBNO1A3KN83 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
SBNO1A3KN83 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SBNO1A3KN83 ECEL1P3-201ENST00000427961 737 ntBASIC28.66■■■□□ 2.18
SBNO1A3KN83 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SBNO1A3KN83 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC28.66■■■□□ 2.18
SBNO1A3KN83 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC28.66■■■□□ 2.18
SBNO1A3KN83 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SBNO1A3KN83 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SBNO1A3KN83 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC28.65■■■□□ 2.18
SBNO1A3KN83 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SBNO1A3KN83 FAM210CP-201ENST00000445714 574 ntBASIC28.65■■■□□ 2.18
SBNO1A3KN83 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SBNO1A3KN83 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC28.65■■■□□ 2.18
SBNO1A3KN83 AC233263.1-201ENST00000578059 224 ntBASIC28.65■■■□□ 2.18
SBNO1A3KN83 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SBNO1A3KN83 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SBNO1A3KN83 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
SBNO1A3KN83 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC28.65■■■□□ 2.18
SBNO1A3KN83 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SBNO1A3KN83 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC28.65■■■□□ 2.18
SBNO1A3KN83 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SBNO1A3KN83 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
SBNO1A3KN83 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC28.65■■■□□ 2.18
SBNO1A3KN83 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC28.65■■■□□ 2.18
SBNO1A3KN83 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SBNO1A3KN83 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC28.64■■■□□ 2.18
SBNO1A3KN83 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
SBNO1A3KN83 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
SBNO1A3KN83 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
SBNO1A3KN83 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC28.64■■■□□ 2.18
SBNO1A3KN83 AL589743.5-201ENST00000616611 1050 ntBASIC28.64■■■□□ 2.18
SBNO1A3KN83 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.18
SBNO1A3KN83 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC28.64■■■□□ 2.18
SBNO1A3KN83 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC28.64■■■□□ 2.18
SBNO1A3KN83 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC28.64■■■□□ 2.18
SBNO1A3KN83 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
SBNO1A3KN83 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC28.64■■■□□ 2.17
SBNO1A3KN83 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
SBNO1A3KN83 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
SBNO1A3KN83 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
SBNO1A3KN83 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC28.63■■■□□ 2.17
SBNO1A3KN83 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC28.63■■■□□ 2.17
SBNO1A3KN83 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
SBNO1A3KN83 AC069544.1-201ENST00000609399 999 ntBASIC28.63■■■□□ 2.17
SBNO1A3KN83 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
SBNO1A3KN83 AC139530.1-201ENST00000575312 1977 ntBASIC28.63■■■□□ 2.17
SBNO1A3KN83 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
SBNO1A3KN83 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC28.62■■■□□ 2.17
SBNO1A3KN83 KRT17P3-201ENST00000420566 1262 ntBASIC28.62■■■□□ 2.17
SBNO1A3KN83 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC28.62■■■□□ 2.17
SBNO1A3KN83 SNORA78-201ENST00000459373 127 ntBASIC28.62■■■□□ 2.17
SBNO1A3KN83 SLC29A4P2-201ENST00000504749 1089 ntBASIC28.62■■■□□ 2.17
SBNO1A3KN83 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC28.62■■■□□ 2.17
SBNO1A3KN83 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
SBNO1A3KN83 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC28.62■■■□□ 2.17
SBNO1A3KN83 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
SBNO1A3KN83 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SBNO1A3KN83 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
SBNO1A3KN83 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC28.62■■■□□ 2.17
SBNO1A3KN83 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC28.62■■■□□ 2.17
SBNO1A3KN83 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC28.62■■■□□ 2.17
SBNO1A3KN83 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
SBNO1A3KN83 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
SBNO1A3KN83 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
SBNO1A3KN83 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
SBNO1A3KN83 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
SBNO1A3KN83 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC28.61■■■□□ 2.17
SBNO1A3KN83 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
SBNO1A3KN83 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC28.61■■■□□ 2.17
SBNO1A3KN83 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
SBNO1A3KN83 MCRIP2P1-201ENST00000394346 511 ntBASIC28.61■■■□□ 2.17
SBNO1A3KN83 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
SBNO1A3KN83 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
SBNO1A3KN83 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC28.61■■■□□ 2.17
SBNO1A3KN83 AC092368.3-202ENST00000574180 1591 ntBASIC28.6■■■□□ 2.17
SBNO1A3KN83 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
SBNO1A3KN83 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
SBNO1A3KN83 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC28.6■■■□□ 2.17
SBNO1A3KN83 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC28.6■■■□□ 2.17
SBNO1A3KN83 COMT-203ENST00000403184 2217 ntTSL 2 BASIC28.59■■■□□ 2.17
SBNO1A3KN83 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC28.59■■■□□ 2.17
SBNO1A3KN83 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC28.59■■■□□ 2.17
SBNO1A3KN83 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC28.59■■■□□ 2.17
SBNO1A3KN83 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC28.59■■■□□ 2.17
SBNO1A3KN83 AC211429.1-201ENST00000415277 523 ntBASIC28.59■■■□□ 2.17
SBNO1A3KN83 CDV3P1-201ENST00000471403 739 ntBASIC28.59■■■□□ 2.17
SBNO1A3KN83 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC28.59■■■□□ 2.17
SBNO1A3KN83 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
SBNO1A3KN83 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms