Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC189A1A4V9 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC189A1A4V9 FEM1AP4-201ENST00000443167 1987 ntBASIC20.89■□□□□ 0.93
CCDC189A1A4V9 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CCDC189A1A4V9 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC189A1A4V9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC189A1A4V9 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC189A1A4V9 MIR4767-201ENST00000582827 78 ntBASIC20.89■□□□□ 0.93
CCDC189A1A4V9 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC189A1A4V9 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC189A1A4V9 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC189A1A4V9 AP006587.3-201ENST00000525742 1516 ntBASIC20.88■□□□□ 0.93
CCDC189A1A4V9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
CCDC189A1A4V9 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC189A1A4V9 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC189A1A4V9 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC189A1A4V9 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC189A1A4V9 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC189A1A4V9 UNC93B3-201ENST00000308076 687 ntBASIC20.88■□□□□ 0.93
CCDC189A1A4V9 SMUG1P1-201ENST00000590640 811 ntBASIC20.88■□□□□ 0.93
CCDC189A1A4V9 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC189A1A4V9 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC189A1A4V9 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
CCDC189A1A4V9 AC087289.5-201ENST00000586076 3175 ntBASIC20.88■□□□□ 0.93
CCDC189A1A4V9 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC189A1A4V9 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC189A1A4V9 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
CCDC189A1A4V9 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC189A1A4V9 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC189A1A4V9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC189A1A4V9 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC189A1A4V9 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC189A1A4V9 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC189A1A4V9 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC189A1A4V9 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC189A1A4V9 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CCDC189A1A4V9 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC189A1A4V9 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.87■□□□□ 0.93
CCDC189A1A4V9 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC189A1A4V9 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.87■□□□□ 0.93
CCDC189A1A4V9 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CCDC189A1A4V9 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC189A1A4V9 AC003102.1-202ENST00000563394 1796 ntBASIC20.87■□□□□ 0.93
CCDC189A1A4V9 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC189A1A4V9 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC189A1A4V9 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC189A1A4V9 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC189A1A4V9 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC189A1A4V9 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC189A1A4V9 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.86■□□□□ 0.93
CCDC189A1A4V9 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC189A1A4V9 IGHV3-19-201ENST00000521488 291 ntBASIC20.86■□□□□ 0.93
CCDC189A1A4V9 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.86■□□□□ 0.93
CCDC189A1A4V9 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
CCDC189A1A4V9 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC189A1A4V9 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CCDC189A1A4V9 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CCDC189A1A4V9 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC189A1A4V9 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CCDC189A1A4V9 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC189A1A4V9 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC189A1A4V9 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.86■□□□□ 0.93
CCDC189A1A4V9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC189A1A4V9 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC189A1A4V9 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC189A1A4V9 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.85■□□□□ 0.93
CCDC189A1A4V9 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.85■□□□□ 0.93
CCDC189A1A4V9 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
CCDC189A1A4V9 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC189A1A4V9 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CCDC189A1A4V9 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC189A1A4V9 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC189A1A4V9 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC189A1A4V9 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC189A1A4V9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CCDC189A1A4V9 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC189A1A4V9 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC189A1A4V9 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.85■□□□□ 0.93
CCDC189A1A4V9 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.85■□□□□ 0.93
CCDC189A1A4V9 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CCDC189A1A4V9 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC189A1A4V9 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC189A1A4V9 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC189A1A4V9 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC189A1A4V9 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC189A1A4V9 AC135279.3-201ENST00000610945 1311 ntBASIC20.84■□□□□ 0.93
CCDC189A1A4V9 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC189A1A4V9 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC189A1A4V9 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC189A1A4V9 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC189A1A4V9 AL136162.1-201ENST00000607711 1078 ntBASIC20.84■□□□□ 0.93
CCDC189A1A4V9 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC189A1A4V9 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC189A1A4V9 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC189A1A4V9 AC009237.3-201ENST00000393279 1427 ntBASIC20.84■□□□□ 0.93
CCDC189A1A4V9 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC189A1A4V9 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
CCDC189A1A4V9 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC189A1A4V9 AL157384.1-201ENST00000445995 2473 ntBASIC20.84■□□□□ 0.93
CCDC189A1A4V9 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms