Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.83■□□□□ 0.28
TCRBV4S1A1TA0A5B7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.83■□□□□ 0.28
TCRBV4S1A1TA0A5B7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.83■□□□□ 0.28
TCRBV4S1A1TA0A5B7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TCRBV4S1A1TA0A5B7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.83■□□□□ 0.28
TCRBV4S1A1TA0A5B7 AC004854.2-201ENST00000608450 1441 ntBASIC16.83■□□□□ 0.28
TCRBV4S1A1TA0A5B7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC16.83■□□□□ 0.28
TCRBV4S1A1TA0A5B7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.83■□□□□ 0.28
TCRBV4S1A1TA0A5B7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.83■□□□□ 0.28
TCRBV4S1A1TA0A5B7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TCRBV4S1A1TA0A5B7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV4S1A1TA0A5B7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TCRBV4S1A1TA0A5B7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV4S1A1TA0A5B7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.82■□□□□ 0.28
TCRBV4S1A1TA0A5B7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV4S1A1TA0A5B7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC16.82■□□□□ 0.28
TCRBV4S1A1TA0A5B7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TCRBV4S1A1TA0A5B7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV4S1A1TA0A5B7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV4S1A1TA0A5B7 AP004607.4-201ENST00000530158 1459 ntBASIC16.82■□□□□ 0.28
TCRBV4S1A1TA0A5B7 AC009237.3-201ENST00000393279 1427 ntBASIC16.82■□□□□ 0.28
TCRBV4S1A1TA0A5B7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV4S1A1TA0A5B7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.82■□□□□ 0.28
TCRBV4S1A1TA0A5B7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TCRBV4S1A1TA0A5B7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.82■□□□□ 0.28
TCRBV4S1A1TA0A5B7 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.82■□□□□ 0.28
TCRBV4S1A1TA0A5B7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV4S1A1TA0A5B7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV4S1A1TA0A5B7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV4S1A1TA0A5B7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV4S1A1TA0A5B7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV4S1A1TA0A5B7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TCRBV4S1A1TA0A5B7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV4S1A1TA0A5B7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV4S1A1TA0A5B7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV4S1A1TA0A5B7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV4S1A1TA0A5B7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV4S1A1TA0A5B7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV4S1A1TA0A5B7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV4S1A1TA0A5B7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV4S1A1TA0A5B7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.81■□□□□ 0.28
TCRBV4S1A1TA0A5B7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV4S1A1TA0A5B7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV4S1A1TA0A5B7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.81■□□□□ 0.28
TCRBV4S1A1TA0A5B7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC16.81■□□□□ 0.28
TCRBV4S1A1TA0A5B7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV4S1A1TA0A5B7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.81■□□□□ 0.28
TCRBV4S1A1TA0A5B7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.81■□□□□ 0.28
TCRBV4S1A1TA0A5B7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV4S1A1TA0A5B7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.81■□□□□ 0.28
TCRBV4S1A1TA0A5B7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.81■□□□□ 0.28
TCRBV4S1A1TA0A5B7 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.81■□□□□ 0.28
TCRBV4S1A1TA0A5B7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TCRBV4S1A1TA0A5B7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
TCRBV4S1A1TA0A5B7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.81■□□□□ 0.28
TCRBV4S1A1TA0A5B7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV4S1A1TA0A5B7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV4S1A1TA0A5B7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV4S1A1TA0A5B7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.8■□□□□ 0.28
TCRBV4S1A1TA0A5B7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV4S1A1TA0A5B7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.8■□□□□ 0.28
TCRBV4S1A1TA0A5B7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.8■□□□□ 0.28
TCRBV4S1A1TA0A5B7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV4S1A1TA0A5B7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
TCRBV4S1A1TA0A5B7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
TCRBV4S1A1TA0A5B7 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.8■□□□□ 0.28
TCRBV4S1A1TA0A5B7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.8■□□□□ 0.28
TCRBV4S1A1TA0A5B7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.8■□□□□ 0.28
TCRBV4S1A1TA0A5B7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV4S1A1TA0A5B7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC16.8■□□□□ 0.28
TCRBV4S1A1TA0A5B7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV4S1A1TA0A5B7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV4S1A1TA0A5B7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV4S1A1TA0A5B7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TCRBV4S1A1TA0A5B7 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TCRBV4S1A1TA0A5B7 OR7E47P-201ENST00000546390 1422 ntBASIC16.79■□□□□ 0.28
TCRBV4S1A1TA0A5B7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV4S1A1TA0A5B7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV4S1A1TA0A5B7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV4S1A1TA0A5B7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV4S1A1TA0A5B7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TCRBV4S1A1TA0A5B7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.79■□□□□ 0.28
TCRBV4S1A1TA0A5B7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV4S1A1TA0A5B7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV4S1A1TA0A5B7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.79■□□□□ 0.28
TCRBV4S1A1TA0A5B7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.79■□□□□ 0.28
TCRBV4S1A1TA0A5B7 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV4S1A1TA0A5B7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TCRBV4S1A1TA0A5B7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV4S1A1TA0A5B7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.79■□□□□ 0.28
TCRBV4S1A1TA0A5B7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.79■□□□□ 0.28
TCRBV4S1A1TA0A5B7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.79■□□□□ 0.28
TCRBV4S1A1TA0A5B7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV4S1A1TA0A5B7 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV4S1A1TA0A5B7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TCRBV4S1A1TA0A5B7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TCRBV4S1A1TA0A5B7 FEM1AP4-201ENST00000443167 1987 ntBASIC16.78■□□□□ 0.28
TCRBV4S1A1TA0A5B7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
TCRBV4S1A1TA0A5B7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCRBV4S1A1TA0A5B7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms