Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TRAV25A0A0B4J276 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV25A0A0B4J276 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV25A0A0B4J276 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV25A0A0B4J276 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV25A0A0B4J276 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV25A0A0B4J276 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV25A0A0B4J276 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV25A0A0B4J276 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV25A0A0B4J276 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV25A0A0B4J276 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC15.77■□□□□ 0.12
TRAV25A0A0B4J276 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
TRAV25A0A0B4J276 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC15.77■□□□□ 0.12
TRAV25A0A0B4J276 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV25A0A0B4J276 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV25A0A0B4J276 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV25A0A0B4J276 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV25A0A0B4J276 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV25A0A0B4J276 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TRAV25A0A0B4J276 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV25A0A0B4J276 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV25A0A0B4J276 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV25A0A0B4J276 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV25A0A0B4J276 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV25A0A0B4J276 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV25A0A0B4J276 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
TRAV25A0A0B4J276 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV25A0A0B4J276 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV25A0A0B4J276 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV25A0A0B4J276 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV25A0A0B4J276 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC15.76■□□□□ 0.11
TRAV25A0A0B4J276 SLC7A5P2-201ENST00000553010 536 ntBASIC15.76■□□□□ 0.11
TRAV25A0A0B4J276 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV25A0A0B4J276 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC15.76■□□□□ 0.11
TRAV25A0A0B4J276 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV25A0A0B4J276 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC15.76■□□□□ 0.11
TRAV25A0A0B4J276 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV25A0A0B4J276 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV25A0A0B4J276 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV25A0A0B4J276 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV25A0A0B4J276 AC061975.6-201ENST00000579045 1553 ntBASIC15.75■□□□□ 0.11
TRAV25A0A0B4J276 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV25A0A0B4J276 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRAV25A0A0B4J276 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV25A0A0B4J276 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRAV25A0A0B4J276 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV25A0A0B4J276 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV25A0A0B4J276 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV25A0A0B4J276 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV25A0A0B4J276 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV25A0A0B4J276 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV25A0A0B4J276 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV25A0A0B4J276 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRAV25A0A0B4J276 IKBKGP1-201ENST00000612193 1073 ntBASIC15.75■□□□□ 0.11
TRAV25A0A0B4J276 AC243732.1-201ENST00000612648 864 ntBASIC15.75■□□□□ 0.11
TRAV25A0A0B4J276 AC011767.1-201ENST00000617410 1153 ntBASIC15.75■□□□□ 0.11
TRAV25A0A0B4J276 AC092437.1-201ENST00000624794 1048 ntBASIC15.75■□□□□ 0.11
TRAV25A0A0B4J276 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV25A0A0B4J276 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV25A0A0B4J276 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC15.75■□□□□ 0.11
TRAV25A0A0B4J276 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV25A0A0B4J276 EP400NL-214ENST00000641289 2402 ntBASIC15.75■□□□□ 0.11
TRAV25A0A0B4J276 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV25A0A0B4J276 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV25A0A0B4J276 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TRAV25A0A0B4J276 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
TRAV25A0A0B4J276 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV25A0A0B4J276 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV25A0A0B4J276 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
TRAV25A0A0B4J276 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV25A0A0B4J276 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TRAV25A0A0B4J276 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
TRAV25A0A0B4J276 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV25A0A0B4J276 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV25A0A0B4J276 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV25A0A0B4J276 AC004911.1-201ENST00000416316 871 ntBASIC15.74■□□□□ 0.11
TRAV25A0A0B4J276 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC15.74■□□□□ 0.11
TRAV25A0A0B4J276 AC245052.3-201ENST00000450182 901 ntBASIC15.74■□□□□ 0.11
TRAV25A0A0B4J276 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV25A0A0B4J276 BRI3-207ENST00000539286 699 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV25A0A0B4J276 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV25A0A0B4J276 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV25A0A0B4J276 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC15.74■□□□□ 0.11
TRAV25A0A0B4J276 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV25A0A0B4J276 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAV25A0A0B4J276 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV25A0A0B4J276 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TRAV25A0A0B4J276 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV25A0A0B4J276 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV25A0A0B4J276 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV25A0A0B4J276 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV25A0A0B4J276 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV25A0A0B4J276 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV25A0A0B4J276 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
TRAV25A0A0B4J276 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TRAV25A0A0B4J276 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TRAV25A0A0B4J276 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV25A0A0B4J276 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV25A0A0B4J276 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV25A0A0B4J276 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms