Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV13-1A0A0B4J241 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV13-1A0A0B4J241 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV13-1A0A0B4J241 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV13-1A0A0B4J241 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV13-1A0A0B4J241 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TRAV13-1A0A0B4J241 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV13-1A0A0B4J241 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV13-1A0A0B4J241 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC14.57□□□□□ -0.08
TRAV13-1A0A0B4J241 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV13-1A0A0B4J241 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC14.57□□□□□ -0.08
TRAV13-1A0A0B4J241 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
TRAV13-1A0A0B4J241 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV13-1A0A0B4J241 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV13-1A0A0B4J241 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV13-1A0A0B4J241 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV13-1A0A0B4J241 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV13-1A0A0B4J241 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV13-1A0A0B4J241 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV13-1A0A0B4J241 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV13-1A0A0B4J241 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV13-1A0A0B4J241 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV13-1A0A0B4J241 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV13-1A0A0B4J241 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV13-1A0A0B4J241 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV13-1A0A0B4J241 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TRAV13-1A0A0B4J241 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRAV13-1A0A0B4J241 UNC93B8-201ENST00000511903 705 ntBASIC14.56□□□□□ -0.08
TRAV13-1A0A0B4J241 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC14.56□□□□□ -0.08
TRAV13-1A0A0B4J241 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TRAV13-1A0A0B4J241 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV13-1A0A0B4J241 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV13-1A0A0B4J241 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRAV13-1A0A0B4J241 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV13-1A0A0B4J241 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV13-1A0A0B4J241 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV13-1A0A0B4J241 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV13-1A0A0B4J241 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV13-1A0A0B4J241 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV13-1A0A0B4J241 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV13-1A0A0B4J241 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV13-1A0A0B4J241 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV13-1A0A0B4J241 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TRAV13-1A0A0B4J241 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV13-1A0A0B4J241 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV13-1A0A0B4J241 LINC01006-201ENST00000333319 2292 ntBASIC14.55□□□□□ -0.08
TRAV13-1A0A0B4J241 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV13-1A0A0B4J241 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV13-1A0A0B4J241 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV13-1A0A0B4J241 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV13-1A0A0B4J241 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV13-1A0A0B4J241 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV13-1A0A0B4J241 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
TRAV13-1A0A0B4J241 KRT16P3-201ENST00000439127 1283 ntBASIC14.55□□□□□ -0.08
TRAV13-1A0A0B4J241 AC010141.3-201ENST00000456659 717 ntBASIC14.55□□□□□ -0.08
TRAV13-1A0A0B4J241 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV13-1A0A0B4J241 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV13-1A0A0B4J241 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV13-1A0A0B4J241 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV13-1A0A0B4J241 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV13-1A0A0B4J241 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV13-1A0A0B4J241 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV13-1A0A0B4J241 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV13-1A0A0B4J241 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV13-1A0A0B4J241 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV13-1A0A0B4J241 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV13-1A0A0B4J241 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV13-1A0A0B4J241 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV13-1A0A0B4J241 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV13-1A0A0B4J241 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV13-1A0A0B4J241 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV13-1A0A0B4J241 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV13-1A0A0B4J241 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRAV13-1A0A0B4J241 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV13-1A0A0B4J241 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TRAV13-1A0A0B4J241 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV13-1A0A0B4J241 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV13-1A0A0B4J241 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV13-1A0A0B4J241 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC14.54□□□□□ -0.08
TRAV13-1A0A0B4J241 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV13-1A0A0B4J241 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV13-1A0A0B4J241 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV13-1A0A0B4J241 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV13-1A0A0B4J241 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV13-1A0A0B4J241 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV13-1A0A0B4J241 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV13-1A0A0B4J241 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV13-1A0A0B4J241 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV13-1A0A0B4J241 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV13-1A0A0B4J241 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRAV13-1A0A0B4J241 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
TRAV13-1A0A0B4J241 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
TRAV13-1A0A0B4J241 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV13-1A0A0B4J241 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
TRAV13-1A0A0B4J241 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV13-1A0A0B4J241 AC092667.1-201ENST00000434301 2586 ntBASIC14.53□□□□□ -0.08
TRAV13-1A0A0B4J241 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV13-1A0A0B4J241 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV13-1A0A0B4J241 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV13-1A0A0B4J241 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms