Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Scn5aQ9JJV9 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.64■■□□□ 1.86
Scn5aQ9JJV9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC26.64■■□□□ 1.85
Scn5aQ9JJV9 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Scn5aQ9JJV9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC26.6■■□□□ 1.85
Scn5aQ9JJV9 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC26.59■■□□□ 1.85
Scn5aQ9JJV9 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Scn5aQ9JJV9 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.58■■□□□ 1.84
Scn5aQ9JJV9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.58■■□□□ 1.84
Scn5aQ9JJV9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Scn5aQ9JJV9 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
Scn5aQ9JJV9 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Scn5aQ9JJV9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Scn5aQ9JJV9 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Scn5aQ9JJV9 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Scn5aQ9JJV9 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Scn5aQ9JJV9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Scn5aQ9JJV9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Scn5aQ9JJV9 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Scn5aQ9JJV9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
Scn5aQ9JJV9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
Scn5aQ9JJV9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC26.49■■□□□ 1.83
Scn5aQ9JJV9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26.49■■□□□ 1.83
Scn5aQ9JJV9 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Scn5aQ9JJV9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC26.48■■□□□ 1.83
Scn5aQ9JJV9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC26.46■■□□□ 1.83
Scn5aQ9JJV9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
Scn5aQ9JJV9 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Scn5aQ9JJV9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Scn5aQ9JJV9 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
Scn5aQ9JJV9 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Scn5aQ9JJV9 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Scn5aQ9JJV9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Scn5aQ9JJV9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Scn5aQ9JJV9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Scn5aQ9JJV9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Scn5aQ9JJV9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC26.4■■□□□ 1.82
Scn5aQ9JJV9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC26.39■■□□□ 1.82
Scn5aQ9JJV9 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.81
Scn5aQ9JJV9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Scn5aQ9JJV9 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Scn5aQ9JJV9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Scn5aQ9JJV9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Scn5aQ9JJV9 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC26.34■■□□□ 1.81
Scn5aQ9JJV9 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Scn5aQ9JJV9 Nkain2-201ENSMUST00000092602 558 ntBASIC26.34■■□□□ 1.81
Scn5aQ9JJV9 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Scn5aQ9JJV9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Scn5aQ9JJV9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Scn5aQ9JJV9 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.32■■□□□ 1.8
Scn5aQ9JJV9 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Scn5aQ9JJV9 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Scn5aQ9JJV9 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Scn5aQ9JJV9 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
Scn5aQ9JJV9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC26.29■■□□□ 1.8
Scn5aQ9JJV9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Scn5aQ9JJV9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Scn5aQ9JJV9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Scn5aQ9JJV9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Scn5aQ9JJV9 Gm7432-201ENSMUST00000210343 879 ntBASIC26.26■■□□□ 1.79
Scn5aQ9JJV9 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Scn5aQ9JJV9 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
Scn5aQ9JJV9 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC26.24■■□□□ 1.79
Scn5aQ9JJV9 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Scn5aQ9JJV9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
Scn5aQ9JJV9 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Scn5aQ9JJV9 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Scn5aQ9JJV9 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC26.22■■□□□ 1.79
Scn5aQ9JJV9 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Scn5aQ9JJV9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Scn5aQ9JJV9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Scn5aQ9JJV9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Scn5aQ9JJV9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Scn5aQ9JJV9 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC26.17■■□□□ 1.78
Scn5aQ9JJV9 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Scn5aQ9JJV9 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC26.17■■□□□ 1.78
Scn5aQ9JJV9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Scn5aQ9JJV9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Scn5aQ9JJV9 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC26.15■■□□□ 1.78
Scn5aQ9JJV9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Scn5aQ9JJV9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Scn5aQ9JJV9 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC26.14■■□□□ 1.77
Scn5aQ9JJV9 Gm11599-201ENSMUST00000118720 878 ntBASIC26.12■■□□□ 1.77
Scn5aQ9JJV9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
Scn5aQ9JJV9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Scn5aQ9JJV9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.11■■□□□ 1.77
Scn5aQ9JJV9 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC26.1■■□□□ 1.77
Scn5aQ9JJV9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC26.1■■□□□ 1.77
Scn5aQ9JJV9 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Scn5aQ9JJV9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Scn5aQ9JJV9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Scn5aQ9JJV9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Scn5aQ9JJV9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Scn5aQ9JJV9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Scn5aQ9JJV9 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Scn5aQ9JJV9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC26.04■■□□□ 1.76
Scn5aQ9JJV9 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
Scn5aQ9JJV9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC26.04■■□□□ 1.76
Scn5aQ9JJV9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Scn5aQ9JJV9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC26.04■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms