Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Rrp8Q9DB85 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
Rrp8Q9DB85 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC24.74■■□□□ 1.55
Rrp8Q9DB85 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Rrp8Q9DB85 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Rrp8Q9DB85 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Rrp8Q9DB85 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.72■■□□□ 1.55
Rrp8Q9DB85 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
Rrp8Q9DB85 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Rrp8Q9DB85 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC24.71■■□□□ 1.55
Rrp8Q9DB85 Nkain2-201ENSMUST00000092602 558 ntBASIC24.71■■□□□ 1.55
Rrp8Q9DB85 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Rrp8Q9DB85 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.69■■□□□ 1.54
Rrp8Q9DB85 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Rrp8Q9DB85 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Rrp8Q9DB85 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Rrp8Q9DB85 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Rrp8Q9DB85 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Rrp8Q9DB85 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Rrp8Q9DB85 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
Rrp8Q9DB85 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Rrp8Q9DB85 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Rrp8Q9DB85 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.64■■□□□ 1.54
Rrp8Q9DB85 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
Rrp8Q9DB85 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Rrp8Q9DB85 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Rrp8Q9DB85 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Rrp8Q9DB85 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC24.62■■□□□ 1.53
Rrp8Q9DB85 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Rrp8Q9DB85 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Rrp8Q9DB85 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Rrp8Q9DB85 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.6■■□□□ 1.53
Rrp8Q9DB85 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Rrp8Q9DB85 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rrp8Q9DB85 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rrp8Q9DB85 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Rrp8Q9DB85 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Rrp8Q9DB85 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC24.57■■□□□ 1.52
Rrp8Q9DB85 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rrp8Q9DB85 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
Rrp8Q9DB85 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.56■■□□□ 1.52
Rrp8Q9DB85 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Rrp8Q9DB85 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rrp8Q9DB85 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rrp8Q9DB85 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Rrp8Q9DB85 Gm7432-201ENSMUST00000210343 879 ntBASIC24.54■■□□□ 1.52
Rrp8Q9DB85 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.54■■□□□ 1.52
Rrp8Q9DB85 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.54■■□□□ 1.52
Rrp8Q9DB85 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Rrp8Q9DB85 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC24.52■■□□□ 1.52
Rrp8Q9DB85 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rrp8Q9DB85 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Rrp8Q9DB85 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
Rrp8Q9DB85 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rrp8Q9DB85 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Rrp8Q9DB85 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24.44■■□□□ 1.5
Rrp8Q9DB85 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
Rrp8Q9DB85 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rrp8Q9DB85 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rrp8Q9DB85 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24.41■■□□□ 1.5
Rrp8Q9DB85 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rrp8Q9DB85 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Rrp8Q9DB85 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Rrp8Q9DB85 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Rrp8Q9DB85 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Rrp8Q9DB85 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.4■■□□□ 1.5
Rrp8Q9DB85 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Rrp8Q9DB85 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Rrp8Q9DB85 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Rrp8Q9DB85 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC24.38■■□□□ 1.49
Rrp8Q9DB85 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rrp8Q9DB85 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rrp8Q9DB85 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rrp8Q9DB85 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rrp8Q9DB85 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Rrp8Q9DB85 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Rrp8Q9DB85 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rrp8Q9DB85 Gm11599-201ENSMUST00000118720 878 ntBASIC24.34■■□□□ 1.49
Rrp8Q9DB85 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.32■■□□□ 1.48
Rrp8Q9DB85 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rrp8Q9DB85 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC24.31■■□□□ 1.48
Rrp8Q9DB85 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Rrp8Q9DB85 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Rrp8Q9DB85 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rrp8Q9DB85 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Rrp8Q9DB85 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rrp8Q9DB85 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Rrp8Q9DB85 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24.26■■□□□ 1.47
Rrp8Q9DB85 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Rrp8Q9DB85 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC24.25■■□□□ 1.47
Rrp8Q9DB85 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Rrp8Q9DB85 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Rrp8Q9DB85 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC24.22■■□□□ 1.47
Rrp8Q9DB85 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rrp8Q9DB85 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.2■■□□□ 1.47
Rrp8Q9DB85 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC24.2■■□□□ 1.46
Rrp8Q9DB85 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Rrp8Q9DB85 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rrp8Q9DB85 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Rrp8Q9DB85 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms