Protein–RNA interactions for Protein: Q9D8B4

Ndufa11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa11Q9D8B4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ndufa11Q9D8B4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.14■■□□□ 1.14
Ndufa11Q9D8B4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ndufa11Q9D8B4 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ndufa11Q9D8B4 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Ndufa11Q9D8B4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ndufa11Q9D8B4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Ndufa11Q9D8B4 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
Ndufa11Q9D8B4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ndufa11Q9D8B4 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Ndufa11Q9D8B4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC22.12■■□□□ 1.13
Ndufa11Q9D8B4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
Ndufa11Q9D8B4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22.12■■□□□ 1.13
Ndufa11Q9D8B4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Ndufa11Q9D8B4 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ndufa11Q9D8B4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ndufa11Q9D8B4 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Ndufa11Q9D8B4 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ndufa11Q9D8B4 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Ndufa11Q9D8B4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ndufa11Q9D8B4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ndufa11Q9D8B4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ndufa11Q9D8B4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ndufa11Q9D8B4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ndufa11Q9D8B4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ndufa11Q9D8B4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ndufa11Q9D8B4 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ndufa11Q9D8B4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Ndufa11Q9D8B4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ndufa11Q9D8B4 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ndufa11Q9D8B4 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ndufa11Q9D8B4 Gm11599-201ENSMUST00000118720 878 ntBASIC22.01■■□□□ 1.11
Ndufa11Q9D8B4 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ndufa11Q9D8B4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Ndufa11Q9D8B4 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ndufa11Q9D8B4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22■■□□□ 1.11
Ndufa11Q9D8B4 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ndufa11Q9D8B4 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Ndufa11Q9D8B4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ndufa11Q9D8B4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.97■■□□□ 1.11
Ndufa11Q9D8B4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ndufa11Q9D8B4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ndufa11Q9D8B4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.96■■□□□ 1.11
Ndufa11Q9D8B4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ndufa11Q9D8B4 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ndufa11Q9D8B4 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.95■■□□□ 1.1
Ndufa11Q9D8B4 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.95■■□□□ 1.1
Ndufa11Q9D8B4 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.95■■□□□ 1.1
Ndufa11Q9D8B4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ndufa11Q9D8B4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ndufa11Q9D8B4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Ndufa11Q9D8B4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ndufa11Q9D8B4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.9■■□□□ 1.1
Ndufa11Q9D8B4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Ndufa11Q9D8B4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ndufa11Q9D8B4 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Ndufa11Q9D8B4 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ndufa11Q9D8B4 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.87■■□□□ 1.09
Ndufa11Q9D8B4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.87■■□□□ 1.09
Ndufa11Q9D8B4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ndufa11Q9D8B4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.86■■□□□ 1.09
Ndufa11Q9D8B4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ndufa11Q9D8B4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ndufa11Q9D8B4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ndufa11Q9D8B4 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.84■■□□□ 1.09
Ndufa11Q9D8B4 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ndufa11Q9D8B4 Mir6538-201ENSMUST00000183713 110 ntBASIC21.82■■□□□ 1.08
Ndufa11Q9D8B4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ndufa11Q9D8B4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ndufa11Q9D8B4 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ndufa11Q9D8B4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ndufa11Q9D8B4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ndufa11Q9D8B4 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ndufa11Q9D8B4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ndufa11Q9D8B4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ndufa11Q9D8B4 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ndufa11Q9D8B4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Ndufa11Q9D8B4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ndufa11Q9D8B4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.77■■□□□ 1.08
Ndufa11Q9D8B4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.77■■□□□ 1.08
Ndufa11Q9D8B4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ndufa11Q9D8B4 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ndufa11Q9D8B4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Ndufa11Q9D8B4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Ndufa11Q9D8B4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.75■■□□□ 1.07
Ndufa11Q9D8B4 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ndufa11Q9D8B4 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Ndufa11Q9D8B4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ndufa11Q9D8B4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.74■■□□□ 1.07
Ndufa11Q9D8B4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.74■■□□□ 1.07
Ndufa11Q9D8B4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ndufa11Q9D8B4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Ndufa11Q9D8B4 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.73■■□□□ 1.07
Ndufa11Q9D8B4 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ndufa11Q9D8B4 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ndufa11Q9D8B4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ndufa11Q9D8B4 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.72■■□□□ 1.07
Ndufa11Q9D8B4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ndufa11Q9D8B4 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.7■■□□□ 1.07
Ndufa11Q9D8B4 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.7■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 8.2 ms