Protein–RNA interactions for Protein: Q9D1C9

Rrp7a, Ribosomal RNA-processing protein 7 homolog A, mousemouse

Known RBP Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp7aQ9D1C9 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC37.45■■■■□ 3.59
Rrp7aQ9D1C9 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC37.44■■■■□ 3.58
Rrp7aQ9D1C9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC37.44■■■■□ 3.58
Rrp7aQ9D1C9 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC37.44■■■■□ 3.58
Rrp7aQ9D1C9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC37.42■■■■□ 3.58
Rrp7aQ9D1C9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC37.42■■■■□ 3.58
Rrp7aQ9D1C9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC37.41■■■■□ 3.58
Rrp7aQ9D1C9 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC37.4■■■■□ 3.58
Rrp7aQ9D1C9 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC37.39■■■■□ 3.58
Rrp7aQ9D1C9 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC37.39■■■■□ 3.58
Rrp7aQ9D1C9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC37.37■■■■□ 3.57
Rrp7aQ9D1C9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC37.37■■■■□ 3.57
Rrp7aQ9D1C9 Gm30346-201ENSMUST00000218641 1699 ntBASIC37.37■■■■□ 3.57
Rrp7aQ9D1C9 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC37.37■■■■□ 3.57
Rrp7aQ9D1C9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC37.36■■■■□ 3.57
Rrp7aQ9D1C9 Nkain2-201ENSMUST00000092602 558 ntBASIC37.34■■■■□ 3.57
Rrp7aQ9D1C9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC37.33■■■■□ 3.57
Rrp7aQ9D1C9 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
Rrp7aQ9D1C9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC37.32■■■■□ 3.57
Rrp7aQ9D1C9 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC37.31■■■■□ 3.56
Rrp7aQ9D1C9 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC37.29■■■■□ 3.56
Rrp7aQ9D1C9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC37.29■■■■□ 3.56
Rrp7aQ9D1C9 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC37.27■■■■□ 3.56
Rrp7aQ9D1C9 Gm2415-204ENSMUST00000190235 2004 ntBASIC37.27■■■■□ 3.56
Rrp7aQ9D1C9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC37.26■■■■□ 3.56
Rrp7aQ9D1C9 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC37.26■■■■□ 3.56
Rrp7aQ9D1C9 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC37.25■■■■□ 3.55
Rrp7aQ9D1C9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC37.24■■■■□ 3.55
Rrp7aQ9D1C9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC37.24■■■■□ 3.55
Rrp7aQ9D1C9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC37.23■■■■□ 3.55
Rrp7aQ9D1C9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC37.23■■■■□ 3.55
Rrp7aQ9D1C9 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC37.23■■■■□ 3.55
Rrp7aQ9D1C9 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC37.23■■■■□ 3.55
Rrp7aQ9D1C9 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
Rrp7aQ9D1C9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
Rrp7aQ9D1C9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC37.19■■■■□ 3.54
Rrp7aQ9D1C9 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC37.17■■■■□ 3.54
Rrp7aQ9D1C9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC37.17■■■■□ 3.54
Rrp7aQ9D1C9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC37.15■■■■□ 3.54
Rrp7aQ9D1C9 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC37.14■■■■□ 3.54
Rrp7aQ9D1C9 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC37.14■■■■□ 3.54
Rrp7aQ9D1C9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC37.14■■■■□ 3.54
Rrp7aQ9D1C9 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC37.14■■■■□ 3.54
Rrp7aQ9D1C9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC37.13■■■■□ 3.54
Rrp7aQ9D1C9 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC37.13■■■■□ 3.53
Rrp7aQ9D1C9 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC37.12■■■■□ 3.53
Rrp7aQ9D1C9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC37.09■■■■□ 3.53
Rrp7aQ9D1C9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC37.04■■■■□ 3.52
Rrp7aQ9D1C9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC37.03■■■■□ 3.52
Rrp7aQ9D1C9 Gm7432-201ENSMUST00000210343 879 ntBASIC37.03■■■■□ 3.52
Rrp7aQ9D1C9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
Rrp7aQ9D1C9 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC37.01■■■■□ 3.52
Rrp7aQ9D1C9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC37.01■■■■□ 3.52
Rrp7aQ9D1C9 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC36.98■■■■□ 3.51
Rrp7aQ9D1C9 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC36.96■■■■□ 3.51
Rrp7aQ9D1C9 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC36.96■■■■□ 3.51
Rrp7aQ9D1C9 Gm6658-202ENSMUST00000209493 1885 ntBASIC36.95■■■■□ 3.51
Rrp7aQ9D1C9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC36.94■■■■□ 3.5
Rrp7aQ9D1C9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC36.92■■■■□ 3.5
Rrp7aQ9D1C9 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC36.92■■■■□ 3.5
Rrp7aQ9D1C9 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC36.89■■■■□ 3.5
Rrp7aQ9D1C9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC36.89■■■■□ 3.5
Rrp7aQ9D1C9 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC36.89■■■■□ 3.5
Rrp7aQ9D1C9 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC36.88■■■■□ 3.49
Rrp7aQ9D1C9 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC36.88■■■■□ 3.49
Rrp7aQ9D1C9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC36.86■■■■□ 3.49
Rrp7aQ9D1C9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC36.86■■■■□ 3.49
Rrp7aQ9D1C9 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC36.86■■■■□ 3.49
Rrp7aQ9D1C9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC36.85■■■■□ 3.49
Rrp7aQ9D1C9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC36.85■■■■□ 3.49
Rrp7aQ9D1C9 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC36.84■■■■□ 3.49
Rrp7aQ9D1C9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC36.84■■■■□ 3.49
Rrp7aQ9D1C9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC36.84■■■■□ 3.49
Rrp7aQ9D1C9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC36.84■■■■□ 3.49
Rrp7aQ9D1C9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC36.82■■■■□ 3.49
Rrp7aQ9D1C9 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC36.82■■■■□ 3.48
Rrp7aQ9D1C9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC36.81■■■■□ 3.48
Rrp7aQ9D1C9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC36.81■■■■□ 3.48
Rrp7aQ9D1C9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC36.81■■■■□ 3.48
Rrp7aQ9D1C9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC36.8■■■■□ 3.48
Rrp7aQ9D1C9 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
Rrp7aQ9D1C9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC36.77■■■■□ 3.48
Rrp7aQ9D1C9 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC36.77■■■■□ 3.48
Rrp7aQ9D1C9 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC36.77■■■■□ 3.48
Rrp7aQ9D1C9 Gm11599-201ENSMUST00000118720 878 ntBASIC36.76■■■■□ 3.48
Rrp7aQ9D1C9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC36.74■■■■□ 3.47
Rrp7aQ9D1C9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC36.72■■■■□ 3.47
Rrp7aQ9D1C9 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC36.71■■■■□ 3.47
Rrp7aQ9D1C9 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC36.7■■■■□ 3.47
Rrp7aQ9D1C9 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC36.69■■■■□ 3.46
Rrp7aQ9D1C9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC36.69■■■■□ 3.46
Rrp7aQ9D1C9 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC36.69■■■■□ 3.46
Rrp7aQ9D1C9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC36.69■■■■□ 3.46
Rrp7aQ9D1C9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC36.68■■■■□ 3.46
Rrp7aQ9D1C9 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC36.68■■■■□ 3.46
Rrp7aQ9D1C9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC36.65■■■■□ 3.46
Rrp7aQ9D1C9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC36.65■■■■□ 3.46
Rrp7aQ9D1C9 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC36.64■■■■□ 3.46
Rrp7aQ9D1C9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC36.63■■■■□ 3.45
Rrp7aQ9D1C9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC36.62■■■■□ 3.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms