Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 MIR3908-201ENST00000579798 126 ntBASIC5.32□□□□□ -1.56
KRTAP4-4Q9BYR3 AP005264.6-201ENST00000592801 414 ntTSL 2 BASIC5.32□□□□□ -1.56
KRTAP4-4Q9BYR3 AL158050.2-201ENST00000605336 568 ntBASIC5.32□□□□□ -1.56
KRTAP4-4Q9BYR3 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC5.32□□□□□ -1.56
KRTAP4-4Q9BYR3 RDM1-219ENST00000615378 542 ntTSL 3 BASIC5.32□□□□□ -1.56
KRTAP4-4Q9BYR3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC5.32□□□□□ -1.56
KRTAP4-4Q9BYR3 AC103798.2-201ENST00000624292 632 ntBASIC5.32□□□□□ -1.56
KRTAP4-4Q9BYR3 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP4-4Q9BYR3 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC5.31□□□□□ -1.56
KRTAP4-4Q9BYR3 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP4-4Q9BYR3 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.31□□□□□ -1.56
KRTAP4-4Q9BYR3 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC5.31□□□□□ -1.56
KRTAP4-4Q9BYR3 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.31□□□□□ -1.56
KRTAP4-4Q9BYR3 AC120057.1-201ENST00000483947 663 ntBASIC5.31□□□□□ -1.56
KRTAP4-4Q9BYR3 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC5.31□□□□□ -1.56
KRTAP4-4Q9BYR3 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP4-4Q9BYR3 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
KRTAP4-4Q9BYR3 AC008592.5-201ENST00000607856 547 ntBASIC5.31□□□□□ -1.56
KRTAP4-4Q9BYR3 AC099786.3-201ENST00000565735 1410 ntBASIC5.31□□□□□ -1.56
KRTAP4-4Q9BYR3 AP004607.7-201ENST00000527152 1677 ntBASIC5.31□□□□□ -1.56
KRTAP4-4Q9BYR3 AC090774.4-201ENST00000578888 1372 ntBASIC5.3□□□□□ -1.56
KRTAP4-4Q9BYR3 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-4Q9BYR3 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-4Q9BYR3 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
KRTAP4-4Q9BYR3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-4Q9BYR3 LIPK-201ENST00000404190 1230 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-4Q9BYR3 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC5.3□□□□□ -1.56
KRTAP4-4Q9BYR3 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC5.3□□□□□ -1.56
KRTAP4-4Q9BYR3 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.3□□□□□ -1.56
KRTAP4-4Q9BYR3 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC5.3□□□□□ -1.56
KRTAP4-4Q9BYR3 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC5.3□□□□□ -1.56
KRTAP4-4Q9BYR3 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KRTAP4-4Q9BYR3 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC5.3□□□□□ -1.56
KRTAP4-4Q9BYR3 AL445523.1-201ENST00000451184 1362 ntBASIC5.29□□□□□ -1.56
KRTAP4-4Q9BYR3 AC092809.4-201ENST00000420350 1323 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP4-4Q9BYR3 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP4-4Q9BYR3 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP4-4Q9BYR3 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP4-4Q9BYR3 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRTAP4-4Q9BYR3 OR2X1P-201ENST00000421144 687 ntBASIC5.29□□□□□ -1.56
KRTAP4-4Q9BYR3 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC5.29□□□□□ -1.56
KRTAP4-4Q9BYR3 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC5.29□□□□□ -1.56
KRTAP4-4Q9BYR3 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.29□□□□□ -1.56
KRTAP4-4Q9BYR3 AL356019.1-201ENST00000553419 748 ntTSL 2 BASIC5.29□□□□□ -1.56
KRTAP4-4Q9BYR3 AC018362.1-201ENST00000564805 846 ntTSL 5 BASIC5.29□□□□□ -1.56
KRTAP4-4Q9BYR3 AC006963.1-201ENST00000624003 1052 ntBASIC5.29□□□□□ -1.56
KRTAP4-4Q9BYR3 AC079416.3-201ENST00000624479 549 ntBASIC5.29□□□□□ -1.56
KRTAP4-4Q9BYR3 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
KRTAP4-4Q9BYR3 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC5.29□□□□□ -1.56
KRTAP4-4Q9BYR3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP4-4Q9BYR3 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP4-4Q9BYR3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP4-4Q9BYR3 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP4-4Q9BYR3 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
KRTAP4-4Q9BYR3 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC5.28□□□□□ -1.56
KRTAP4-4Q9BYR3 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC5.28□□□□□ -1.56
KRTAP4-4Q9BYR3 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC5.28□□□□□ -1.56
KRTAP4-4Q9BYR3 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC5.28□□□□□ -1.56
KRTAP4-4Q9BYR3 AP002365.1-201ENST00000603448 772 ntBASIC5.28□□□□□ -1.56
KRTAP4-4Q9BYR3 AC004908.3-201ENST00000610248 625 ntBASIC5.28□□□□□ -1.56
KRTAP4-4Q9BYR3 AC069503.1-202ENST00000616576 642 ntBASIC5.28□□□□□ -1.56
KRTAP4-4Q9BYR3 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KRTAP4-4Q9BYR3 FAM122C-202ENST00000370785 1344 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP4-4Q9BYR3 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP4-4Q9BYR3 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP4-4Q9BYR3 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP4-4Q9BYR3 AC016550.1-201ENST00000505348 785 ntBASIC5.27□□□□□ -1.57
KRTAP4-4Q9BYR3 VBP1-203ENST00000535916 944 ntTSL 2 BASIC5.27□□□□□ -1.57
KRTAP4-4Q9BYR3 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC5.27□□□□□ -1.57
KRTAP4-4Q9BYR3 AC004777.1-201ENST00000624317 287 ntBASIC5.27□□□□□ -1.57
KRTAP4-4Q9BYR3 AC006927.4-201ENST00000639187 543 ntBASIC5.27□□□□□ -1.57
KRTAP4-4Q9BYR3 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
KRTAP4-4Q9BYR3 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP4-4Q9BYR3 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP4-4Q9BYR3 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP4-4Q9BYR3 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
KRTAP4-4Q9BYR3 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC5.26□□□□□ -1.57
KRTAP4-4Q9BYR3 RPL12P24-201ENST00000474907 486 ntBASIC5.26□□□□□ -1.57
KRTAP4-4Q9BYR3 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP4-4Q9BYR3 DYNLL1-208ENST00000550178 581 ntBASIC5.26□□□□□ -1.57
KRTAP4-4Q9BYR3 AC068313.1-201ENST00000604028 1008 ntBASIC5.26□□□□□ -1.57
KRTAP4-4Q9BYR3 AC244517.3-201ENST00000616254 1235 ntBASIC5.26□□□□□ -1.57
KRTAP4-4Q9BYR3 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC5.26□□□□□ -1.57
KRTAP4-4Q9BYR3 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.26□□□□□ -1.57
KRTAP4-4Q9BYR3 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP4-4Q9BYR3 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP4-4Q9BYR3 GBP1P1-201ENST00000394662 1740 ntBASIC5.26□□□□□ -1.57
KRTAP4-4Q9BYR3 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
KRTAP4-4Q9BYR3 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
KRTAP4-4Q9BYR3 SEPT7P2-202ENST00000398921 823 ntBASIC5.25□□□□□ -1.57
KRTAP4-4Q9BYR3 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
KRTAP4-4Q9BYR3 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
KRTAP4-4Q9BYR3 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.25□□□□□ -1.57
KRTAP4-4Q9BYR3 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC5.25□□□□□ -1.57
KRTAP4-4Q9BYR3 IMMP2L-204ENST00000447215 1164 ntTSL 3 BASIC5.25□□□□□ -1.57
KRTAP4-4Q9BYR3 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.25□□□□□ -1.57
KRTAP4-4Q9BYR3 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC5.25□□□□□ -1.57
KRTAP4-4Q9BYR3 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.25□□□□□ -1.57
KRTAP4-4Q9BYR3 UCHL1-AS1-202ENST00000510073 451 ntTSL 3 BASIC5.25□□□□□ -1.57
KRTAP4-4Q9BYR3 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 8.6 ms