Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC28.05■■■□□ 2.08
Usp6nlQ80XC3 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Usp6nlQ80XC3 Gm30346-201ENSMUST00000218641 1699 ntBASIC28.04■■■□□ 2.08
Usp6nlQ80XC3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC28.04■■■□□ 2.08
Usp6nlQ80XC3 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC28.04■■■□□ 2.08
Usp6nlQ80XC3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
Usp6nlQ80XC3 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC28.01■■■□□ 2.07
Usp6nlQ80XC3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC28■■■□□ 2.07
Usp6nlQ80XC3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Usp6nlQ80XC3 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Usp6nlQ80XC3 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.98■■■□□ 2.07
Usp6nlQ80XC3 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Usp6nlQ80XC3 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Usp6nlQ80XC3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Usp6nlQ80XC3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Usp6nlQ80XC3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
Usp6nlQ80XC3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC27.95■■■□□ 2.06
Usp6nlQ80XC3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
Usp6nlQ80XC3 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Usp6nlQ80XC3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
Usp6nlQ80XC3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC27.94■■■□□ 2.06
Usp6nlQ80XC3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Usp6nlQ80XC3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Usp6nlQ80XC3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Usp6nlQ80XC3 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC27.92■■■□□ 2.06
Usp6nlQ80XC3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Usp6nlQ80XC3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Usp6nlQ80XC3 Nkain2-201ENSMUST00000092602 558 ntBASIC27.91■■■□□ 2.06
Usp6nlQ80XC3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC27.9■■■□□ 2.06
Usp6nlQ80XC3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC27.89■■■□□ 2.05
Usp6nlQ80XC3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC27.88■■■□□ 2.05
Usp6nlQ80XC3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
Usp6nlQ80XC3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Usp6nlQ80XC3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC27.86■■■□□ 2.05
Usp6nlQ80XC3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC27.85■■■□□ 2.05
Usp6nlQ80XC3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Usp6nlQ80XC3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC27.83■■■□□ 2.05
Usp6nlQ80XC3 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Usp6nlQ80XC3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Usp6nlQ80XC3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Usp6nlQ80XC3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Usp6nlQ80XC3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Usp6nlQ80XC3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Usp6nlQ80XC3 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Usp6nlQ80XC3 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Usp6nlQ80XC3 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Usp6nlQ80XC3 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
Usp6nlQ80XC3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Usp6nlQ80XC3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Usp6nlQ80XC3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC27.76■■■□□ 2.03
Usp6nlQ80XC3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Usp6nlQ80XC3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Usp6nlQ80XC3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Usp6nlQ80XC3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC27.73■■■□□ 2.03
Usp6nlQ80XC3 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.73■■■□□ 2.03
Usp6nlQ80XC3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC27.73■■■□□ 2.03
Usp6nlQ80XC3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Usp6nlQ80XC3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Usp6nlQ80XC3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC27.69■■■□□ 2.02
Usp6nlQ80XC3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC27.69■■■□□ 2.02
Usp6nlQ80XC3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC27.68■■■□□ 2.02
Usp6nlQ80XC3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.68■■■□□ 2.02
Usp6nlQ80XC3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
Usp6nlQ80XC3 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Usp6nlQ80XC3 Gm7432-201ENSMUST00000210343 879 ntBASIC27.67■■■□□ 2.02
Usp6nlQ80XC3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Usp6nlQ80XC3 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Usp6nlQ80XC3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC27.64■■■□□ 2.02
Usp6nlQ80XC3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Usp6nlQ80XC3 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Usp6nlQ80XC3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Usp6nlQ80XC3 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC27.62■■■□□ 2.01
Usp6nlQ80XC3 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Usp6nlQ80XC3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Usp6nlQ80XC3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Usp6nlQ80XC3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC27.58■■■□□ 2.01
Usp6nlQ80XC3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC27.57■■■□□ 2
Usp6nlQ80XC3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Usp6nlQ80XC3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Usp6nlQ80XC3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC27.56■■■□□ 2
Usp6nlQ80XC3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC27.56■■■□□ 2
Usp6nlQ80XC3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC27.55■■■□□ 2
Usp6nlQ80XC3 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC27.55■■■□□ 2
Usp6nlQ80XC3 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
Usp6nlQ80XC3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC27.53■■■□□ 2
Usp6nlQ80XC3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Usp6nlQ80XC3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Usp6nlQ80XC3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Usp6nlQ80XC3 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
Usp6nlQ80XC3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Usp6nlQ80XC3 Gm11599-201ENSMUST00000118720 878 ntBASIC27.47■■□□□ 1.99
Usp6nlQ80XC3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Usp6nlQ80XC3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC27.45■■□□□ 1.98
Usp6nlQ80XC3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC27.45■■□□□ 1.98
Usp6nlQ80XC3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Usp6nlQ80XC3 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC27.44■■□□□ 1.98
Usp6nlQ80XC3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC27.44■■□□□ 1.98
Usp6nlQ80XC3 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC27.43■■□□□ 1.98
Usp6nlQ80XC3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Usp6nlQ80XC3 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC27.42■■□□□ 1.98
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms