Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC30.54■■■□□ 2.48
Scn9aQ62205 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC30.53■■■□□ 2.48
Scn9aQ62205 Gm7432-201ENSMUST00000210343 879 ntBASIC30.53■■■□□ 2.48
Scn9aQ62205 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC30.52■■■□□ 2.48
Scn9aQ62205 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
Scn9aQ62205 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Scn9aQ62205 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Scn9aQ62205 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
Scn9aQ62205 Nkain2-201ENSMUST00000092602 558 ntBASIC30.49■■■□□ 2.47
Scn9aQ62205 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Scn9aQ62205 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC30.47■■■□□ 2.47
Scn9aQ62205 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Scn9aQ62205 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Scn9aQ62205 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Scn9aQ62205 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Scn9aQ62205 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC30.46■■■□□ 2.47
Scn9aQ62205 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC30.45■■■□□ 2.47
Scn9aQ62205 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
Scn9aQ62205 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.47
Scn9aQ62205 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
Scn9aQ62205 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC30.43■■■□□ 2.46
Scn9aQ62205 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC30.43■■■□□ 2.46
Scn9aQ62205 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC30.43■■■□□ 2.46
Scn9aQ62205 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC30.43■■■□□ 2.46
Scn9aQ62205 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Scn9aQ62205 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Scn9aQ62205 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Scn9aQ62205 Gm2415-204ENSMUST00000190235 2004 ntBASIC30.4■■■□□ 2.46
Scn9aQ62205 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC30.39■■■□□ 2.45
Scn9aQ62205 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
Scn9aQ62205 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Scn9aQ62205 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Scn9aQ62205 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Scn9aQ62205 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC30.36■■■□□ 2.45
Scn9aQ62205 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Scn9aQ62205 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
Scn9aQ62205 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Scn9aQ62205 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Scn9aQ62205 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC30.34■■■□□ 2.45
Scn9aQ62205 Gm30346-201ENSMUST00000218641 1699 ntBASIC30.33■■■□□ 2.45
Scn9aQ62205 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
Scn9aQ62205 Gm11599-201ENSMUST00000118720 878 ntBASIC30.32■■■□□ 2.44
Scn9aQ62205 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Scn9aQ62205 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC30.32■■■□□ 2.44
Scn9aQ62205 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.44
Scn9aQ62205 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Scn9aQ62205 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC30.3■■■□□ 2.44
Scn9aQ62205 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Scn9aQ62205 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Scn9aQ62205 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
Scn9aQ62205 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.28■■■□□ 2.44
Scn9aQ62205 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Scn9aQ62205 Mir6538-201ENSMUST00000183713 110 ntBASIC30.27■■■□□ 2.44
Scn9aQ62205 Gm11175-201ENSMUST00000116172 543 ntBASIC30.26■■■□□ 2.44
Scn9aQ62205 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC30.23■■■□□ 2.43
Scn9aQ62205 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Scn9aQ62205 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
Scn9aQ62205 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC30.2■■■□□ 2.43
Scn9aQ62205 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Scn9aQ62205 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Scn9aQ62205 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Scn9aQ62205 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Scn9aQ62205 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Scn9aQ62205 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Scn9aQ62205 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC30.16■■■□□ 2.42
Scn9aQ62205 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
Scn9aQ62205 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Scn9aQ62205 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC30.15■■■□□ 2.42
Scn9aQ62205 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Scn9aQ62205 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Scn9aQ62205 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Scn9aQ62205 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Scn9aQ62205 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Scn9aQ62205 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Scn9aQ62205 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC30.11■■■□□ 2.41
Scn9aQ62205 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Scn9aQ62205 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Scn9aQ62205 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC30.08■■■□□ 2.41
Scn9aQ62205 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Scn9aQ62205 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Scn9aQ62205 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Scn9aQ62205 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.04■■■□□ 2.4
Scn9aQ62205 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
Scn9aQ62205 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
Scn9aQ62205 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
Scn9aQ62205 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Scn9aQ62205 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC30.02■■■□□ 2.4
Scn9aQ62205 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Scn9aQ62205 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Scn9aQ62205 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
Scn9aQ62205 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC30■■■□□ 2.39
Scn9aQ62205 Cap2-205ENSMUST00000225824 1634 ntBASIC29.99■■■□□ 2.39
Scn9aQ62205 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
Scn9aQ62205 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC29.99■■■□□ 2.39
Scn9aQ62205 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC29.97■■■□□ 2.39
Scn9aQ62205 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC29.97■■■□□ 2.39
Scn9aQ62205 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC29.97■■■□□ 2.39
Scn9aQ62205 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Scn9aQ62205 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Scn9aQ62205 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms