Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Notch3Q61982 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Notch3Q61982 Gm2415-204ENSMUST00000190235 2004 ntBASIC18.86■□□□□ 0.61
Notch3Q61982 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.84■□□□□ 0.61
Notch3Q61982 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Notch3Q61982 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Notch3Q61982 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC18.83■□□□□ 0.61
Notch3Q61982 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Notch3Q61982 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.82■□□□□ 0.6
Notch3Q61982 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Notch3Q61982 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Notch3Q61982 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Notch3Q61982 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.8■□□□□ 0.6
Notch3Q61982 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Notch3Q61982 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.8■□□□□ 0.6
Notch3Q61982 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.78■□□□□ 0.6
Notch3Q61982 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Notch3Q61982 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Notch3Q61982 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Notch3Q61982 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Notch3Q61982 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.76■□□□□ 0.59
Notch3Q61982 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.75■□□□□ 0.59
Notch3Q61982 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Notch3Q61982 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Notch3Q61982 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Notch3Q61982 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Notch3Q61982 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Notch3Q61982 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.72■□□□□ 0.59
Notch3Q61982 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Notch3Q61982 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Notch3Q61982 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Notch3Q61982 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
Notch3Q61982 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Notch3Q61982 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Notch3Q61982 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.69■□□□□ 0.58
Notch3Q61982 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Notch3Q61982 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Notch3Q61982 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Notch3Q61982 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Notch3Q61982 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
Notch3Q61982 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Notch3Q61982 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.67■□□□□ 0.58
Notch3Q61982 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Notch3Q61982 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Notch3Q61982 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Notch3Q61982 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.66■□□□□ 0.58
Notch3Q61982 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Notch3Q61982 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Notch3Q61982 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Notch3Q61982 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Notch3Q61982 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Notch3Q61982 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Notch3Q61982 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Notch3Q61982 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Notch3Q61982 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Notch3Q61982 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.62■□□□□ 0.57
Notch3Q61982 Nkain2-201ENSMUST00000092602 558 ntBASIC18.62■□□□□ 0.57
Notch3Q61982 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Notch3Q61982 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Notch3Q61982 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Notch3Q61982 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Notch3Q61982 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Notch3Q61982 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Notch3Q61982 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Notch3Q61982 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Notch3Q61982 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC18.59■□□□□ 0.57
Notch3Q61982 Gm11599-201ENSMUST00000118720 878 ntBASIC18.58■□□□□ 0.57
Notch3Q61982 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Notch3Q61982 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Notch3Q61982 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Notch3Q61982 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
Notch3Q61982 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Notch3Q61982 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Notch3Q61982 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Notch3Q61982 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Notch3Q61982 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Notch3Q61982 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Notch3Q61982 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Notch3Q61982 Gm6658-202ENSMUST00000209493 1885 ntBASIC18.55■□□□□ 0.56
Notch3Q61982 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Notch3Q61982 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.55■□□□□ 0.56
Notch3Q61982 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Notch3Q61982 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.54■□□□□ 0.56
Notch3Q61982 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Notch3Q61982 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Notch3Q61982 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.53■□□□□ 0.56
Notch3Q61982 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Notch3Q61982 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Notch3Q61982 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Notch3Q61982 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Notch3Q61982 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Notch3Q61982 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Notch3Q61982 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.52■□□□□ 0.56
Notch3Q61982 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Notch3Q61982 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Notch3Q61982 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Notch3Q61982 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Notch3Q61982 Gm11175-201ENSMUST00000116172 543 ntBASIC18.5■□□□□ 0.55
Notch3Q61982 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Notch3Q61982 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 8.2 ms