Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
Rnf43Q5NCP0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25.62■■□□□ 1.69
Rnf43Q5NCP0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Rnf43Q5NCP0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
Rnf43Q5NCP0 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
Rnf43Q5NCP0 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC25.6■■□□□ 1.69
Rnf43Q5NCP0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Rnf43Q5NCP0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC25.6■■□□□ 1.69
Rnf43Q5NCP0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Rnf43Q5NCP0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Rnf43Q5NCP0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
Rnf43Q5NCP0 Nkain2-201ENSMUST00000092602 558 ntBASIC25.59■■□□□ 1.69
Rnf43Q5NCP0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Rnf43Q5NCP0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC25.58■■□□□ 1.69
Rnf43Q5NCP0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC25.57■■□□□ 1.68
Rnf43Q5NCP0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC25.55■■□□□ 1.68
Rnf43Q5NCP0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Rnf43Q5NCP0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC25.55■■□□□ 1.68
Rnf43Q5NCP0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Rnf43Q5NCP0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Rnf43Q5NCP0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
Rnf43Q5NCP0 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Rnf43Q5NCP0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Rnf43Q5NCP0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
Rnf43Q5NCP0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Rnf43Q5NCP0 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Rnf43Q5NCP0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Rnf43Q5NCP0 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.68
Rnf43Q5NCP0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Rnf43Q5NCP0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Rnf43Q5NCP0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Rnf43Q5NCP0 Gm30346-201ENSMUST00000218641 1699 ntBASIC25.49■■□□□ 1.67
Rnf43Q5NCP0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Rnf43Q5NCP0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Rnf43Q5NCP0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
Rnf43Q5NCP0 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Rnf43Q5NCP0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Rnf43Q5NCP0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Rnf43Q5NCP0 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Rnf43Q5NCP0 Gm7432-201ENSMUST00000210343 879 ntBASIC25.45■■□□□ 1.66
Rnf43Q5NCP0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
Rnf43Q5NCP0 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Rnf43Q5NCP0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Rnf43Q5NCP0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Rnf43Q5NCP0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.43■■□□□ 1.66
Rnf43Q5NCP0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC25.42■■□□□ 1.66
Rnf43Q5NCP0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Rnf43Q5NCP0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Rnf43Q5NCP0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Rnf43Q5NCP0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rnf43Q5NCP0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC25.41■■□□□ 1.66
Rnf43Q5NCP0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Rnf43Q5NCP0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Rnf43Q5NCP0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
Rnf43Q5NCP0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Rnf43Q5NCP0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Rnf43Q5NCP0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Rnf43Q5NCP0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Rnf43Q5NCP0 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rnf43Q5NCP0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Rnf43Q5NCP0 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Rnf43Q5NCP0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Rnf43Q5NCP0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Rnf43Q5NCP0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.35■■□□□ 1.65
Rnf43Q5NCP0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rnf43Q5NCP0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.31■■□□□ 1.64
Rnf43Q5NCP0 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Rnf43Q5NCP0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Rnf43Q5NCP0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
Rnf43Q5NCP0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Rnf43Q5NCP0 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
Rnf43Q5NCP0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Rnf43Q5NCP0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25.27■■□□□ 1.64
Rnf43Q5NCP0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Rnf43Q5NCP0 Gm11599-201ENSMUST00000118720 878 ntBASIC25.25■■□□□ 1.63
Rnf43Q5NCP0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC25.25■■□□□ 1.63
Rnf43Q5NCP0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Rnf43Q5NCP0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Rnf43Q5NCP0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC25.24■■□□□ 1.63
Rnf43Q5NCP0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Rnf43Q5NCP0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC25.23■■□□□ 1.63
Rnf43Q5NCP0 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.23■■□□□ 1.63
Rnf43Q5NCP0 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Rnf43Q5NCP0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25.22■■□□□ 1.63
Rnf43Q5NCP0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Rnf43Q5NCP0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rnf43Q5NCP0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.21■■□□□ 1.63
Rnf43Q5NCP0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC25.21■■□□□ 1.63
Rnf43Q5NCP0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
Rnf43Q5NCP0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
Rnf43Q5NCP0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Rnf43Q5NCP0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Rnf43Q5NCP0 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Rnf43Q5NCP0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Rnf43Q5NCP0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC25.15■■□□□ 1.62
Rnf43Q5NCP0 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Rnf43Q5NCP0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Rnf43Q5NCP0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Rnf43Q5NCP0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Rnf43Q5NCP0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.13■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms