Protein–RNA interactions for Protein: Q3UNW5

Tfcp2l1, Transcription factor CP2-like protein 1, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tfcp2l1Q3UNW5 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Tfcp2l1Q3UNW5 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
Tfcp2l1Q3UNW5 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC29.31■■■□□ 2.28
Tfcp2l1Q3UNW5 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Tfcp2l1Q3UNW5 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC29.31■■■□□ 2.28
Tfcp2l1Q3UNW5 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC29.3■■■□□ 2.28
Tfcp2l1Q3UNW5 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Tfcp2l1Q3UNW5 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Tfcp2l1Q3UNW5 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Tfcp2l1Q3UNW5 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC29.27■■■□□ 2.28
Tfcp2l1Q3UNW5 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC29.27■■■□□ 2.28
Tfcp2l1Q3UNW5 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC29.27■■■□□ 2.28
Tfcp2l1Q3UNW5 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
Tfcp2l1Q3UNW5 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Tfcp2l1Q3UNW5 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC29.26■■■□□ 2.27
Tfcp2l1Q3UNW5 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Tfcp2l1Q3UNW5 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
Tfcp2l1Q3UNW5 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Tfcp2l1Q3UNW5 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Tfcp2l1Q3UNW5 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Tfcp2l1Q3UNW5 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Tfcp2l1Q3UNW5 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Tfcp2l1Q3UNW5 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Tfcp2l1Q3UNW5 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Tfcp2l1Q3UNW5 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Tfcp2l1Q3UNW5 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC29.22■■■□□ 2.27
Tfcp2l1Q3UNW5 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC29.22■■■□□ 2.27
Tfcp2l1Q3UNW5 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Tfcp2l1Q3UNW5 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Tfcp2l1Q3UNW5 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC29.2■■■□□ 2.26
Tfcp2l1Q3UNW5 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC29.19■■■□□ 2.26
Tfcp2l1Q3UNW5 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Tfcp2l1Q3UNW5 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Tfcp2l1Q3UNW5 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Tfcp2l1Q3UNW5 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC29.18■■■□□ 2.26
Tfcp2l1Q3UNW5 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC29.18■■■□□ 2.26
Tfcp2l1Q3UNW5 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Tfcp2l1Q3UNW5 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC29.16■■■□□ 2.26
Tfcp2l1Q3UNW5 Gm11599-201ENSMUST00000118720 878 ntBASIC29.16■■■□□ 2.26
Tfcp2l1Q3UNW5 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC29.15■■■□□ 2.26
Tfcp2l1Q3UNW5 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Tfcp2l1Q3UNW5 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC29.15■■■□□ 2.26
Tfcp2l1Q3UNW5 Gm2415-204ENSMUST00000190235 2004 ntBASIC29.14■■■□□ 2.26
Tfcp2l1Q3UNW5 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Tfcp2l1Q3UNW5 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Tfcp2l1Q3UNW5 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Tfcp2l1Q3UNW5 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC29.1■■■□□ 2.25
Tfcp2l1Q3UNW5 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC29.09■■■□□ 2.25
Tfcp2l1Q3UNW5 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
Tfcp2l1Q3UNW5 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Tfcp2l1Q3UNW5 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC29.08■■■□□ 2.25
Tfcp2l1Q3UNW5 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC29.07■■■□□ 2.24
Tfcp2l1Q3UNW5 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC29.06■■■□□ 2.24
Tfcp2l1Q3UNW5 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC29.06■■■□□ 2.24
Tfcp2l1Q3UNW5 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC29.06■■■□□ 2.24
Tfcp2l1Q3UNW5 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Tfcp2l1Q3UNW5 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
Tfcp2l1Q3UNW5 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC29.05■■■□□ 2.24
Tfcp2l1Q3UNW5 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
Tfcp2l1Q3UNW5 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
Tfcp2l1Q3UNW5 Mir6538-201ENSMUST00000183713 110 ntBASIC29.01■■■□□ 2.23
Tfcp2l1Q3UNW5 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Tfcp2l1Q3UNW5 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC28.99■■■□□ 2.23
Tfcp2l1Q3UNW5 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Tfcp2l1Q3UNW5 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Tfcp2l1Q3UNW5 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Tfcp2l1Q3UNW5 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
Tfcp2l1Q3UNW5 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Tfcp2l1Q3UNW5 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Tfcp2l1Q3UNW5 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Tfcp2l1Q3UNW5 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Tfcp2l1Q3UNW5 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC28.93■■■□□ 2.22
Tfcp2l1Q3UNW5 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Tfcp2l1Q3UNW5 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
Tfcp2l1Q3UNW5 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
Tfcp2l1Q3UNW5 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Tfcp2l1Q3UNW5 Gm6658-202ENSMUST00000209493 1885 ntBASIC28.91■■■□□ 2.22
Tfcp2l1Q3UNW5 Gm11175-201ENSMUST00000116172 543 ntBASIC28.9■■■□□ 2.22
Tfcp2l1Q3UNW5 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC28.89■■■□□ 2.22
Tfcp2l1Q3UNW5 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC28.89■■■□□ 2.21
Tfcp2l1Q3UNW5 Gm30346-201ENSMUST00000218641 1699 ntBASIC28.88■■■□□ 2.21
Tfcp2l1Q3UNW5 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Tfcp2l1Q3UNW5 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Tfcp2l1Q3UNW5 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Tfcp2l1Q3UNW5 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC28.85■■■□□ 2.21
Tfcp2l1Q3UNW5 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC28.85■■■□□ 2.21
Tfcp2l1Q3UNW5 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Tfcp2l1Q3UNW5 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC28.84■■■□□ 2.21
Tfcp2l1Q3UNW5 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC28.84■■■□□ 2.21
Tfcp2l1Q3UNW5 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
Tfcp2l1Q3UNW5 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Tfcp2l1Q3UNW5 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC28.83■■■□□ 2.21
Tfcp2l1Q3UNW5 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC28.81■■■□□ 2.2
Tfcp2l1Q3UNW5 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
Tfcp2l1Q3UNW5 Cap2-205ENSMUST00000225824 1634 ntBASIC28.8■■■□□ 2.2
Tfcp2l1Q3UNW5 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC28.79■■■□□ 2.2
Tfcp2l1Q3UNW5 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
Tfcp2l1Q3UNW5 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Tfcp2l1Q3UNW5 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC28.75■■■□□ 2.19
Tfcp2l1Q3UNW5 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms