Protein–RNA interactions for Protein: Q3UHU5

Mtcl1, Microtubule cross-linking factor 1, mousemouse

Predictions only

Length 1,945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mtcl1Q3UHU5 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC30,89■■■□□ 2,54
Mtcl1Q3UHU5 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC30,88■■■□□ 2,53
Mtcl1Q3UHU5 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC30,88■■■□□ 2,53
Mtcl1Q3UHU5 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC30,88■■■□□ 2,53
Mtcl1Q3UHU5 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC30,87■■■□□ 2,53
Mtcl1Q3UHU5 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC30,87■■■□□ 2,53
Mtcl1Q3UHU5 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC30,86■■■□□ 2,53
Mtcl1Q3UHU5 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC30,85■■■□□ 2,53
Mtcl1Q3UHU5 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC30,85■■■□□ 2,53
Mtcl1Q3UHU5 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC30,85■■■□□ 2,53
Mtcl1Q3UHU5 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC30,83■■■□□ 2,53
Mtcl1Q3UHU5 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC30,83■■■□□ 2,53
Mtcl1Q3UHU5 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC30,8■■■□□ 2,52
Mtcl1Q3UHU5 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC30,79■■■□□ 2,52
Mtcl1Q3UHU5 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC30,78■■■□□ 2,52
Mtcl1Q3UHU5 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC30,78■■■□□ 2,52
Mtcl1Q3UHU5 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC30,76■■■□□ 2,51
Mtcl1Q3UHU5 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC30,76■■■□□ 2,51
Mtcl1Q3UHU5 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC30,76■■■□□ 2,51
Mtcl1Q3UHU5 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC30,76■■■□□ 2,51
Mtcl1Q3UHU5 Gm30346-201ENSMUST00000218641 1699 ntBASIC30,75■■■□□ 2,51
Mtcl1Q3UHU5 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC30,75■■■□□ 2,51
Mtcl1Q3UHU5 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC30,75■■■□□ 2,51
Mtcl1Q3UHU5 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC30,74■■■□□ 2,51
Mtcl1Q3UHU5 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC30,73■■■□□ 2,51
Mtcl1Q3UHU5 Nkain2-201ENSMUST00000092602 558 ntBASIC30,72■■■□□ 2,51
Mtcl1Q3UHU5 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC30,71■■■□□ 2,51
Mtcl1Q3UHU5 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC30,71■■■□□ 2,51
Mtcl1Q3UHU5 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC30,7■■■□□ 2,5
Mtcl1Q3UHU5 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30,68■■■□□ 2,5
Mtcl1Q3UHU5 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC30,68■■■□□ 2,5
Mtcl1Q3UHU5 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC30,67■■■□□ 2,5
Mtcl1Q3UHU5 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC30,67■■■□□ 2,5
Mtcl1Q3UHU5 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC30,67■■■□□ 2,5
Mtcl1Q3UHU5 Gm7432-201ENSMUST00000210343 879 ntBASIC30,66■■■□□ 2,5
Mtcl1Q3UHU5 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC30,65■■■□□ 2,5
Mtcl1Q3UHU5 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC30,65■■■□□ 2,5
Mtcl1Q3UHU5 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC30,65■■■□□ 2,5
Mtcl1Q3UHU5 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC30,63■■■□□ 2,49
Mtcl1Q3UHU5 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC30,63■■■□□ 2,49
Mtcl1Q3UHU5 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC30,63■■■□□ 2,49
Mtcl1Q3UHU5 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC30,63■■■□□ 2,49
Mtcl1Q3UHU5 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC30,61■■■□□ 2,49
Mtcl1Q3UHU5 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC30,6■■■□□ 2,49
Mtcl1Q3UHU5 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC30,6■■■□□ 2,49
Mtcl1Q3UHU5 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC30,59■■■□□ 2,49
Mtcl1Q3UHU5 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC30,59■■■□□ 2,49
Mtcl1Q3UHU5 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC30,56■■■□□ 2,48
Mtcl1Q3UHU5 Gm11599-201ENSMUST00000118720 878 ntBASIC30,55■■■□□ 2,48
Mtcl1Q3UHU5 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC30,55■■■□□ 2,48
Mtcl1Q3UHU5 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30,54■■■□□ 2,48
Mtcl1Q3UHU5 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC30,54■■■□□ 2,48
Mtcl1Q3UHU5 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC30,54■■■□□ 2,48
Mtcl1Q3UHU5 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC30,53■■■□□ 2,48
Mtcl1Q3UHU5 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC30,53■■■□□ 2,48
Mtcl1Q3UHU5 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC30,53■■■□□ 2,48
Mtcl1Q3UHU5 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC30,52■■■□□ 2,48
Mtcl1Q3UHU5 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC30,51■■■□□ 2,47
Mtcl1Q3UHU5 Gm11175-201ENSMUST00000116172 543 ntBASIC30,5■■■□□ 2,47
Mtcl1Q3UHU5 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC30,47■■■□□ 2,47
Mtcl1Q3UHU5 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30,47■■■□□ 2,47
Mtcl1Q3UHU5 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC30,47■■■□□ 2,47
Mtcl1Q3UHU5 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC30,46■■■□□ 2,47
Mtcl1Q3UHU5 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC30,45■■■□□ 2,46
Mtcl1Q3UHU5 Gm2415-204ENSMUST00000190235 2004 ntBASIC30,45■■■□□ 2,46
Mtcl1Q3UHU5 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC30,44■■■□□ 2,46
Mtcl1Q3UHU5 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC30,44■■■□□ 2,46
Mtcl1Q3UHU5 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC30,43■■■□□ 2,46
Mtcl1Q3UHU5 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC30,43■■■□□ 2,46
Mtcl1Q3UHU5 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC30,43■■■□□ 2,46
Mtcl1Q3UHU5 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC30,43■■■□□ 2,46
Mtcl1Q3UHU5 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC30,42■■■□□ 2,46
Mtcl1Q3UHU5 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30,42■■■□□ 2,46
Mtcl1Q3UHU5 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC30,42■■■□□ 2,46
Mtcl1Q3UHU5 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC30,41■■■□□ 2,46
Mtcl1Q3UHU5 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30,4■■■□□ 2,46
Mtcl1Q3UHU5 Mir6538-201ENSMUST00000183713 110 ntBASIC30,38■■■□□ 2,45
Mtcl1Q3UHU5 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC30,37■■■□□ 2,45
Mtcl1Q3UHU5 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC30,37■■■□□ 2,45
Mtcl1Q3UHU5 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30,36■■■□□ 2,45
Mtcl1Q3UHU5 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC30,35■■■□□ 2,45
Mtcl1Q3UHU5 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC30,35■■■□□ 2,45
Mtcl1Q3UHU5 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30,35■■■□□ 2,45
Mtcl1Q3UHU5 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC30,34■■■□□ 2,45
Mtcl1Q3UHU5 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC30,34■■■□□ 2,45
Mtcl1Q3UHU5 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC30,33■■■□□ 2,45
Mtcl1Q3UHU5 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC30,32■■■□□ 2,44
Mtcl1Q3UHU5 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC30,32■■■□□ 2,44
Mtcl1Q3UHU5 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC30,31■■■□□ 2,44
Mtcl1Q3UHU5 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC30,31■■■□□ 2,44
Mtcl1Q3UHU5 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC30,31■■■□□ 2,44
Mtcl1Q3UHU5 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC30,3■■■□□ 2,44
Mtcl1Q3UHU5 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC30,3■■■□□ 2,44
Mtcl1Q3UHU5 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC30,29■■■□□ 2,44
Mtcl1Q3UHU5 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC30,28■■■□□ 2,44
Mtcl1Q3UHU5 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC30,26■■■□□ 2,44
Mtcl1Q3UHU5 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC30,24■■■□□ 2,43
Mtcl1Q3UHU5 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC30,22■■■□□ 2,43
Mtcl1Q3UHU5 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC30,22■■■□□ 2,43
Mtcl1Q3UHU5 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC30,21■■■□□ 2,43
Retrieved 100 of 76,532 protein–RNA pairs in 9,7 ms