Protein–RNA interactions for Protein: Q12242

RUP1, UBA domain-containing protein RUP1, yeastyeast

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RUP1Q12242 DMA2YNL116W 1569 nt9.21□□□□□ -0.93
RUP1Q12242 BRR1YPR057W 1026 nt9.21□□□□□ -0.94
RUP1Q12242 RSC8YFR037C 1674 nt9.2□□□□□ -0.94
RUP1Q12242 YMR226CYMR226C 804 nt9.2□□□□□ -0.94
RUP1Q12242 ACH1YBL015W 1581 nt9.2□□□□□ -0.94
RUP1Q12242 YGR012WYGR012W 1182 nt9.19□□□□□ -0.94
RUP1Q12242 TOA2YKL058W 369 nt9.19□□□□□ -0.94
RUP1Q12242 RAD23YEL037C 1197 nt9.18□□□□□ -0.94
RUP1Q12242 YLR111WYLR111W 333 nt9.18□□□□□ -0.94
RUP1Q12242 YPL251WYPL251W 303 nt9.18□□□□□ -0.94
RUP1Q12242 RBG2YGR173W 1107 nt9.17□□□□□ -0.94
RUP1Q12242 TRT2tT(CGU)K 72 nt9.17□□□□□ -0.94
RUP1Q12242 YLR279WYLR279W 390 nt9.17□□□□□ -0.94
RUP1Q12242 ZTA1YBR046C 1005 nt9.17□□□□□ -0.94
RUP1Q12242 ALP1YNL270C 1722 nt9.17□□□□□ -0.94
RUP1Q12242 FMS1YMR020W 1527 nt9.16□□□□□ -0.94
RUP1Q12242 VPS62YGR141W 1404 nt9.15□□□□□ -0.94
RUP1Q12242 HMG2YLR450W 3138 nt9.15□□□□□ -0.94
RUP1Q12242 UGA4YDL210W 1716 nt9.15□□□□□ -0.94
RUP1Q12242 SPP2YOR148C 558 nt9.15□□□□□ -0.94
RUP1Q12242 QDR2YIL121W 1629 nt9.15□□□□□ -0.94
RUP1Q12242 AKR2YOR034C 2250 nt9.14□□□□□ -0.95
RUP1Q12242 YDL086WYDL086W 822 nt9.14□□□□□ -0.95
RUP1Q12242 GND2YGR256W 1479 nt9.14□□□□□ -0.95
RUP1Q12242 TPO4YOR273C 1980 nt9.12□□□□□ -0.95
RUP1Q12242 MSB4YOL112W 1479 nt9.12□□□□□ -0.95
RUP1Q12242 YHR218WYHR218W 1812 nt9.12□□□□□ -0.95
RUP1Q12242 DIG1YPL049C 1359 nt9.12□□□□□ -0.95
RUP1Q12242 ODC1YPL134C 933 nt9.11□□□□□ -0.95
RUP1Q12242 YPS3YLR121C 1527 nt9.1□□□□□ -0.95
RUP1Q12242 RIB3YDR487C 627 nt9.08□□□□□ -0.96
RUP1Q12242 SSL2YIL143C 2532 nt9.08□□□□□ -0.96
RUP1Q12242 FLR1YBR008C 1647 nt9.07□□□□□ -0.96
RUP1Q12242 CAB5YDR196C 726 nt9.07□□□□□ -0.96
RUP1Q12242 YLR437C-AYLR437C-A 228 nt9.07□□□□□ -0.96
RUP1Q12242 GID8YMR135C 1368 nt9.07□□□□□ -0.96
RUP1Q12242 MEP3YPR138C 1470 nt9.05□□□□□ -0.96
RUP1Q12242 SAM2YDR502C 1155 nt9.05□□□□□ -0.96
RUP1Q12242 OXA1YER154W 1209 nt9.05□□□□□ -0.96
RUP1Q12242 YPL222C-AYPL222C-A 246 nt9.05□□□□□ -0.96
RUP1Q12242 YMR103CYMR103C 363 nt9.04□□□□□ -0.96
RUP1Q12242 SEC61YLR378C 1443 nt9.03□□□□□ -0.96
RUP1Q12242 MDM35YKL053C-A 261 nt9.02□□□□□ -0.97
RUP1Q12242 MRS6YOR370C 1812 nt9.02□□□□□ -0.97
RUP1Q12242 DLD2YDL178W 1593 nt9.02□□□□□ -0.97
RUP1Q12242 YKL133CYKL133C 1392 nt9.01□□□□□ -0.97
RUP1Q12242 CWP2YKL096W-A 279 nt9□□□□□ -0.97
RUP1Q12242 HXK1YFR053C 1458 nt8.99□□□□□ -0.97
RUP1Q12242 FCY21YER060W 1587 nt8.98□□□□□ -0.97
RUP1Q12242 ALD5YER073W 1563 nt8.97□□□□□ -0.97
RUP1Q12242 YHR219WYHR219W 1875 nt8.97□□□□□ -0.97
RUP1Q12242 HEM13YDR044W 987 nt8.96□□□□□ -0.98
RUP1Q12242 GND1YHR183W 1470 nt8.96□□□□□ -0.98
RUP1Q12242 NPP1YCR026C 2229 nt8.95□□□□□ -0.98
RUP1Q12242 APT2YDR441C 546 nt8.95□□□□□ -0.98
RUP1Q12242 HXT10YFL011W 1641 nt8.94□□□□□ -0.98
RUP1Q12242 PCP1YGR101W 1041 nt8.93□□□□□ -0.98
RUP1Q12242 LOT5YKL183W 921 nt8.93□□□□□ -0.98
RUP1Q12242 FRE6YLL051C 2139 nt8.93□□□□□ -0.98
RUP1Q12242 SSN3YPL042C 1668 nt8.91□□□□□ -0.98
RUP1Q12242 SMM1YNR015W 1155 nt8.9□□□□□ -0.98
RUP1Q12242 YER188WYER188W 720 nt8.89□□□□□ -0.99
RUP1Q12242 YPI1YFR003C 468 nt8.88□□□□□ -0.99
RUP1Q12242 PHO23YNL097C 993 nt8.88□□□□□ -0.99
RUP1Q12242 DLD3YEL071W 1491 nt8.88□□□□□ -0.99
RUP1Q12242 RPD3YNL330C 1302 nt8.87□□□□□ -0.99
RUP1Q12242 MSC1YML128C 1542 nt8.87□□□□□ -0.99
RUP1Q12242 TIM44YIL022W 1296 nt8.87□□□□□ -0.99
RUP1Q12242 PRY1YJL079C 900 nt8.87□□□□□ -0.99
RUP1Q12242 ENT4YLL038C 744 nt8.87□□□□□ -0.99
RUP1Q12242 LSR1LSR1 1175 nt8.87□□□□□ -0.99
RUP1Q12242 YOR072WYOR072W 315 nt8.87□□□□□ -0.99
RUP1Q12242 FUB1YCR076C 753 nt8.86□□□□□ -0.99
RUP1Q12242 BNI5YNL166C 1347 nt8.85□□□□□ -0.99
RUP1Q12242 AIM1YAL046C 357 nt8.85□□□□□ -0.99
RUP1Q12242 YLR046CYLR046C 813 nt8.85□□□□□ -0.99
RUP1Q12242 NBA1YOL070C 1506 nt8.85□□□□□ -0.99
RUP1Q12242 AGP3YFL055W 1677 nt8.85□□□□□ -0.99
RUP1Q12242 OSH7YHR001W 1314 nt8.84□□□□□ -0.99
RUP1Q12242 URA8YJR103W 1737 nt8.84□□□□□ -0.99
RUP1Q12242 YMR262WYMR262W 942 nt8.84□□□□□ -0.99
RUP1Q12242 LSB3YFR024C-A 1380 nt8.83□□□□□ -1
RUP1Q12242 KRR1YCL059C 951 nt8.81□□□□□ -1
RUP1Q12242 ADH1YOL086C 1047 nt8.81□□□□□ -1
RUP1Q12242 CSM1YCR086W 573 nt8.8□□□□□ -1
RUP1Q12242 YNR029CYNR029C 1290 nt8.8□□□□□ -1
RUP1Q12242 HXT12YIL170W 1374 nt8.8□□□□□ -1
RUP1Q12242 TAT2YOL020W 1779 nt8.78□□□□□ -1
RUP1Q12242 VMA11YPL234C 495 nt8.77□□□□□ -1.01
RUP1Q12242 RIM2YBR192W 1134 nt8.77□□□□□ -1.01
RUP1Q12242 ASP3-1YLR155C 1089 nt8.76□□□□□ -1.01
RUP1Q12242 ASP3-2YLR157C 1089 nt8.76□□□□□ -1.01
RUP1Q12242 ASP3-3YLR158C 1089 nt8.76□□□□□ -1.01
RUP1Q12242 ASP3-4YLR160C 1089 nt8.76□□□□□ -1.01
RUP1Q12242 GPN2YOR262W 1044 nt8.76□□□□□ -1.01
RUP1Q12242 VRG4YGL225W 1014 nt8.75□□□□□ -1.01
RUP1Q12242 RPC31YNL151C 756 nt8.75□□□□□ -1.01
RUP1Q12242 ITR2YOL103W 1830 nt8.75□□□□□ -1.01
RUP1Q12242 RIB2YOL066C 1776 nt8.74□□□□□ -1.01
RUP1Q12242 INH1YDL181W 258 nt8.74□□□□□ -1.01
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms