Protein–RNA interactions for Protein: Q05787

HRD3, ERAD-associated E3 ubiquitin-protein ligase component HRD3, yeastyeast

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD3Q05787 SSN3YPL042C 1668 nt9.55□□□□□ -0.88
HRD3Q05787 BNI5YNL166C 1347 nt9.53□□□□□ -0.88
HRD3Q05787 RPM1RPM1 483 nt9.52□□□□□ -0.89
HRD3Q05787 LSB5YCL034W 1065 nt9.52□□□□□ -0.89
HRD3Q05787 URA6YKL024C 615 nt9.51□□□□□ -0.89
HRD3Q05787 PHO23YNL097C 993 nt9.51□□□□□ -0.89
HRD3Q05787 ZRT3YKL175W 1512 nt9.51□□□□□ -0.89
HRD3Q05787 YJL118WYJL118W 660 nt9.5□□□□□ -0.89
HRD3Q05787 NUC1YJL208C 990 nt9.49□□□□□ -0.89
HRD3Q05787 OYE3YPL171C 1203 nt9.49□□□□□ -0.89
HRD3Q05787 SAM3YPL274W 1764 nt9.49□□□□□ -0.89
HRD3Q05787 PBP1YGR178C 2169 nt9.48□□□□□ -0.89
HRD3Q05787 MSC1YML128C 1542 nt9.47□□□□□ -0.89
HRD3Q05787 GAL3YDR009W 1563 nt9.47□□□□□ -0.89
HRD3Q05787 SAM2YDR502C 1155 nt9.47□□□□□ -0.89
HRD3Q05787 RPT5YOR117W 1305 nt9.47□□□□□ -0.89
HRD3Q05787 SEC61YLR378C 1443 nt9.46□□□□□ -0.9
HRD3Q05787 CCT5YJR064W 1689 nt9.45□□□□□ -0.9
HRD3Q05787 ESS1YJR017C 513 nt9.45□□□□□ -0.9
HRD3Q05787 OXA1YER154W 1209 nt9.44□□□□□ -0.9
HRD3Q05787 tS(GCU)LtS(GCU)L 80 nt9.43□□□□□ -0.9
HRD3Q05787 PET8YNL003C 855 nt9.43□□□□□ -0.9
HRD3Q05787 YJL067WYJL067W 351 nt9.42□□□□□ -0.9
HRD3Q05787 NAR1YNL240C 1476 nt9.41□□□□□ -0.9
HRD3Q05787 FUB1YCR076C 753 nt9.41□□□□□ -0.9
HRD3Q05787 CYT2YKL087C 675 nt9.41□□□□□ -0.9
HRD3Q05787 RIB7YBR153W 735 nt9.41□□□□□ -0.9
HRD3Q05787 YER188WYER188W 720 nt9.4□□□□□ -0.9
HRD3Q05787 FLR1YBR008C 1647 nt9.38□□□□□ -0.91
HRD3Q05787 DLD2YDL178W 1593 nt9.37□□□□□ -0.91
HRD3Q05787 TPS1YBR126C 1488 nt9.37□□□□□ -0.91
HRD3Q05787 SNZ1YMR096W 894 nt9.37□□□□□ -0.91
HRD3Q05787 RAS2YNL098C 969 nt9.37□□□□□ -0.91
HRD3Q05787 THI72YOR192C 1800 nt9.36□□□□□ -0.91
HRD3Q05787 OYE2YHR179W 1203 nt9.35□□□□□ -0.91
HRD3Q05787 PAU5YFL020C 369 nt9.34□□□□□ -0.91
HRD3Q05787 PGC1YPL206C 966 nt9.34□□□□□ -0.91
HRD3Q05787 RSC8YFR037C 1674 nt9.34□□□□□ -0.91
HRD3Q05787 FMS1YMR020W 1527 nt9.33□□□□□ -0.92
HRD3Q05787 EAF3YPR023C 1206 nt9.33□□□□□ -0.92
HRD3Q05787 YPS3YLR121C 1527 nt9.32□□□□□ -0.92
HRD3Q05787 TAF13YML098W 504 nt9.31□□□□□ -0.92
HRD3Q05787 YPR126CYPR126C 309 nt9.3□□□□□ -0.92
HRD3Q05787 SPP2YOR148C 558 nt9.29□□□□□ -0.92
HRD3Q05787 OSH7YHR001W 1314 nt9.29□□□□□ -0.92
HRD3Q05787 HEM13YDR044W 987 nt9.28□□□□□ -0.92
HRD3Q05787 CWC15YDR163W 528 nt9.28□□□□□ -0.92
HRD3Q05787 YBR232CYBR232C 360 nt9.28□□□□□ -0.92
HRD3Q05787 STP3YLR375W 1032 nt9.27□□□□□ -0.93
HRD3Q05787 DAK2YFL053W 1776 nt9.27□□□□□ -0.93
HRD3Q05787 SEN2YLR105C 1134 nt9.26□□□□□ -0.93
HRD3Q05787 RDN25-1RDN25-1 3396 nt9.26□□□□□ -0.93
HRD3Q05787 RDN25-2RDN25-2 3396 nt9.26□□□□□ -0.93
HRD3Q05787 YAT1YAR035W 2064 nt9.25□□□□□ -0.93
HRD3Q05787 YMR262WYMR262W 942 nt9.25□□□□□ -0.93
HRD3Q05787 TMA23YMR269W 636 nt9.25□□□□□ -0.93
HRD3Q05787 SOL2YCR073W-A 948 nt9.24□□□□□ -0.93
HRD3Q05787 DDI1YER143W 1287 nt9.24□□□□□ -0.93
HRD3Q05787 MHF1YOL086W-A 273 nt9.24□□□□□ -0.93
HRD3Q05787 CTI6YPL181W 1521 nt9.24□□□□□ -0.93
HRD3Q05787 ACH1YBL015W 1581 nt9.24□□□□□ -0.93
HRD3Q05787 LSM5YER146W 282 nt9.21□□□□□ -0.94
HRD3Q05787 TAT2YOL020W 1779 nt9.21□□□□□ -0.94
HRD3Q05787 POT1YIL160C 1254 nt9.2□□□□□ -0.94
HRD3Q05787 NAP1YKR048C 1254 nt9.2□□□□□ -0.94
HRD3Q05787 IML3YBR107C 738 nt9.2□□□□□ -0.94
HRD3Q05787 YNL024CYNL024C 741 nt9.19□□□□□ -0.94
HRD3Q05787 YDR455CYDR455C 309 nt9.18□□□□□ -0.94
HRD3Q05787 PUP1YOR157C 786 nt9.18□□□□□ -0.94
HRD3Q05787 IMO32YGR031W 1029 nt9.17□□□□□ -0.94
HRD3Q05787 INA1YLR413W 2028 nt9.17□□□□□ -0.94
HRD3Q05787 VPS62YGR141W 1404 nt9.16□□□□□ -0.94
HRD3Q05787 YJL064WYJL064W 396 nt9.16□□□□□ -0.94
HRD3Q05787 APS2YJR058C 444 nt9.16□□□□□ -0.94
HRD3Q05787 GSF2YML048W 1212 nt9.16□□□□□ -0.94
HRD3Q05787 TUB4YLR212C 1422 nt9.14□□□□□ -0.95
HRD3Q05787 RPC82YPR190C 1965 nt9.14□□□□□ -0.95
HRD3Q05787 YFR036W-AYFR036W-A 651 nt9.12□□□□□ -0.95
HRD3Q05787 NIF3YGL221C 867 nt9.12□□□□□ -0.95
HRD3Q05787 YIL100C-AYIL100C-A 339 nt9.12□□□□□ -0.95
HRD3Q05787 ASP3-1YLR155C 1089 nt9.12□□□□□ -0.95
HRD3Q05787 ASP3-2YLR157C 1089 nt9.12□□□□□ -0.95
HRD3Q05787 ASP3-3YLR158C 1089 nt9.12□□□□□ -0.95
HRD3Q05787 ASP3-4YLR160C 1089 nt9.12□□□□□ -0.95
HRD3Q05787 PAU19YMR325W 375 nt9.12□□□□□ -0.95
HRD3Q05787 PAR32YDL173W 888 nt9.11□□□□□ -0.95
HRD3Q05787 YDL086WYDL086W 822 nt9.1□□□□□ -0.95
HRD3Q05787 SPS100YHR139C 981 nt9.1□□□□□ -0.95
HRD3Q05787 RRT8YOL048C 1029 nt9.1□□□□□ -0.95
HRD3Q05787 ERG13YML126C 1476 nt9.09□□□□□ -0.95
HRD3Q05787 ADE8YDR408C 645 nt9.07□□□□□ -0.96
HRD3Q05787 YOR325WYOR325W 474 nt9.06□□□□□ -0.96
HRD3Q05787 CCT2YIL142W 1584 nt9.05□□□□□ -0.96
HRD3Q05787 AIM1YAL046C 357 nt9.04□□□□□ -0.96
HRD3Q05787 CMP2YML057W 1815 nt9.03□□□□□ -0.96
HRD3Q05787 ILV3YJR016C 1758 nt9.03□□□□□ -0.96
HRD3Q05787 OPI10YOL032W 741 nt9.02□□□□□ -0.97
HRD3Q05787 TVP23YDR084C 600 nt9.01□□□□□ -0.97
HRD3Q05787 NME1NME1 340 nt9.01□□□□□ -0.97
HRD3Q05787 YJR114WYJR114W 393 nt9□□□□□ -0.97
Retrieved 100 of 7,029 protein–RNA pairs in 8.6 ms