Protein–RNA interactions for Protein: P47017

LSM1, Sm-like protein LSm1, yeastyeast

Known RBP Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM1P47017 UBA4YHR111W 1323 nt8.23□□□□□ -1.09
LSM1P47017 TPN1YGL186C 1740 nt8.23□□□□□ -1.09
LSM1P47017 AKR2YOR034C 2250 nt8.22□□□□□ -1.09
LSM1P47017 FRA1YLL029W 2250 nt8.22□□□□□ -1.09
LSM1P47017 QDR2YIL121W 1629 nt8.21□□□□□ -1.09
LSM1P47017 MDL2YPL270W 2322 nt8.21□□□□□ -1.09
LSM1P47017 YCR087WYCR087W 516 nt8.21□□□□□ -1.1
LSM1P47017 RRT5YFR032C 870 nt8.21□□□□□ -1.1
LSM1P47017 OYE3YPL171C 1203 nt8.21□□□□□ -1.1
LSM1P47017 BRR1YPR057W 1026 nt8.21□□□□□ -1.1
LSM1P47017 MEX67YPL169C 1800 nt8.2□□□□□ -1.1
LSM1P47017 MIR1YJR077C 936 nt8.2□□□□□ -1.1
LSM1P47017 YSR3YKR053C 1215 nt8.2□□□□□ -1.1
LSM1P47017 SAM2YDR502C 1155 nt8.19□□□□□ -1.1
LSM1P47017 CLB6YGR109C 1143 nt8.19□□□□□ -1.1
LSM1P47017 TOM71YHR117W 1920 nt8.19□□□□□ -1.1
LSM1P47017 MTG2YHR168W 1557 nt8.18□□□□□ -1.1
LSM1P47017 LEU9YOR108W 1815 nt8.18□□□□□ -1.1
LSM1P47017 UTH1YKR042W 1098 nt8.18□□□□□ -1.1
LSM1P47017 UFO1YML088W 2007 nt8.18□□□□□ -1.1
LSM1P47017 MCM5YLR274W 2328 nt8.18□□□□□ -1.1
LSM1P47017 ALP1YNL270C 1722 nt8.17□□□□□ -1.1
LSM1P47017 MDM35YKL053C-A 261 nt8.17□□□□□ -1.1
LSM1P47017 COQ2YNR041C 1119 nt8.17□□□□□ -1.1
LSM1P47017 FIT3YOR383C 615 nt8.17□□□□□ -1.1
LSM1P47017 GND2YGR256W 1479 nt8.17□□□□□ -1.1
LSM1P47017 HXT10YFL011W 1641 nt8.16□□□□□ -1.1
LSM1P47017 DIG1YPL049C 1359 nt8.15□□□□□ -1.1
LSM1P47017 TRT2tT(CGU)K 72 nt8.15□□□□□ -1.1
LSM1P47017 RPL4BYDR012W 1089 nt8.14□□□□□ -1.11
LSM1P47017 SPP2YOR148C 558 nt8.14□□□□□ -1.11
LSM1P47017 RPL4AYBR031W 1089 nt8.14□□□□□ -1.11
LSM1P47017 YPL251WYPL251W 303 nt8.14□□□□□ -1.11
LSM1P47017 SSL2YIL143C 2532 nt8.13□□□□□ -1.11
LSM1P47017 VPS62YGR141W 1404 nt8.13□□□□□ -1.11
LSM1P47017 GID8YMR135C 1368 nt8.13□□□□□ -1.11
LSM1P47017 THI74YDR438W 1113 nt8.13□□□□□ -1.11
LSM1P47017 SBA1YKL117W 651 nt8.13□□□□□ -1.11
LSM1P47017 ZTA1YBR046C 1005 nt8.12□□□□□ -1.11
LSM1P47017 PHO23YNL097C 993 nt8.11□□□□□ -1.11
LSM1P47017 NBA1YOL070C 1506 nt8.11□□□□□ -1.11
LSM1P47017 LSR1LSR1 1175 nt8.1□□□□□ -1.11
LSM1P47017 YDL086WYDL086W 822 nt8.09□□□□□ -1.11
LSM1P47017 YMR103CYMR103C 363 nt8.09□□□□□ -1.11
LSM1P47017 NSG2YNL156C 900 nt8.09□□□□□ -1.11
LSM1P47017 YKL133CYKL133C 1392 nt8.09□□□□□ -1.12
LSM1P47017 LPD1YFL018C 1500 nt8.08□□□□□ -1.12
LSM1P47017 MRS6YOR370C 1812 nt8.07□□□□□ -1.12
LSM1P47017 XYL2YLR070C 1071 nt8.06□□□□□ -1.12
LSM1P47017 AIM45YPR004C 1035 nt8.06□□□□□ -1.12
LSM1P47017 FMS1YMR020W 1527 nt8.06□□□□□ -1.12
LSM1P47017 UFD1YGR048W 1086 nt8.05□□□□□ -1.12
LSM1P47017 SFL1YOR140W 2301 nt8.04□□□□□ -1.12
LSM1P47017 SEC61YLR378C 1443 nt8.04□□□□□ -1.12
LSM1P47017 ALR1YOL130W 2580 nt8.04□□□□□ -1.12
LSM1P47017 CWP2YKL096W-A 279 nt8.04□□□□□ -1.12
LSM1P47017 NAT4YMR069W 858 nt8.04□□□□□ -1.12
LSM1P47017 ACH1YBL015W 1581 nt8.03□□□□□ -1.12
LSM1P47017 MAS1YLR163C 1389 nt8.03□□□□□ -1.12
LSM1P47017 YDR094WYDR094W 336 nt8.03□□□□□ -1.12
LSM1P47017 RPS14BYJL191W 417 nt8.03□□□□□ -1.12
LSM1P47017 PAU16YKL224C 372 nt8.02□□□□□ -1.13
LSM1P47017 MIM1YOL026C 342 nt8.02□□□□□ -1.13
LSM1P47017 YPS3YLR121C 1527 nt8.02□□□□□ -1.13
LSM1P47017 AGP3YFL055W 1677 nt8.02□□□□□ -1.13
LSM1P47017 TIM44YIL022W 1296 nt8.01□□□□□ -1.13
LSM1P47017 LSB5YCL034W 1065 nt8.01□□□□□ -1.13
LSM1P47017 DAK2YFL053W 1776 nt8.01□□□□□ -1.13
LSM1P47017 MSF1YPR047W 1410 nt8.01□□□□□ -1.13
LSM1P47017 YGL034CYGL034C 366 nt7.99□□□□□ -1.13
LSM1P47017 FLR1YBR008C 1647 nt7.99□□□□□ -1.13
LSM1P47017 OXA1YER154W 1209 nt7.98□□□□□ -1.13
LSM1P47017 YLR173WYLR173W 1827 nt7.98□□□□□ -1.13
LSM1P47017 DLD2YDL178W 1593 nt7.97□□□□□ -1.13
LSM1P47017 tD(GUC)BtD(GUC)B 72 nt7.97□□□□□ -1.13
LSM1P47017 tD(GUC)DtD(GUC)D 72 nt7.97□□□□□ -1.13
LSM1P47017 tD(GUC)G1tD(GUC)G1 72 nt7.97□□□□□ -1.13
LSM1P47017 tD(GUC)G2tD(GUC)G2 72 nt7.97□□□□□ -1.13
LSM1P47017 tD(GUC)I1tD(GUC)I1 72 nt7.97□□□□□ -1.13
LSM1P47017 tD(GUC)I2tD(GUC)I2 72 nt7.97□□□□□ -1.13
LSM1P47017 tD(GUC)J1tD(GUC)J1 72 nt7.97□□□□□ -1.13
LSM1P47017 tD(GUC)J2tD(GUC)J2 72 nt7.97□□□□□ -1.13
LSM1P47017 tD(GUC)J3tD(GUC)J3 72 nt7.97□□□□□ -1.13
LSM1P47017 tD(GUC)J4tD(GUC)J4 72 nt7.97□□□□□ -1.13
LSM1P47017 tD(GUC)KtD(GUC)K 72 nt7.97□□□□□ -1.13
LSM1P47017 tD(GUC)L1tD(GUC)L1 72 nt7.97□□□□□ -1.13
LSM1P47017 tD(GUC)L2tD(GUC)L2 72 nt7.97□□□□□ -1.13
LSM1P47017 tD(GUC)MtD(GUC)M 72 nt7.97□□□□□ -1.13
LSM1P47017 tD(GUC)OtD(GUC)O 72 nt7.97□□□□□ -1.13
LSM1P47017 FIT1YDR534C 1587 nt7.97□□□□□ -1.13
LSM1P47017 TSC10YBR265W 963 nt7.96□□□□□ -1.14
LSM1P47017 YHR219WYHR219W 1875 nt7.96□□□□□ -1.14
LSM1P47017 YER188WYER188W 720 nt7.95□□□□□ -1.14
LSM1P47017 RPD3YNL330C 1302 nt7.94□□□□□ -1.14
LSM1P47017 YMR262WYMR262W 942 nt7.93□□□□□ -1.14
LSM1P47017 OSH7YHR001W 1314 nt7.93□□□□□ -1.14
LSM1P47017 SDH5YOL071W 489 nt7.92□□□□□ -1.14
LSM1P47017 HBS1YKR084C 1836 nt7.92□□□□□ -1.14
LSM1P47017 INH1YDL181W 258 nt7.91□□□□□ -1.14
LSM1P47017 RTG2YGL252C 1767 nt7.9□□□□□ -1.14
Retrieved 100 of 7,029 protein–RNA pairs in 7.6 ms