Protein–RNA interactions for Protein: P38811

TRA1, Transcription-associated protein 1, yeastyeast

Predictions only

Length 3,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRA1P38811 HSP60YLR259C 1719 nt8.12□□□□□ -1.11
TRA1P38811 YJL118WYJL118W 660 nt8.11□□□□□ -1.11
TRA1P38811 CTI6YPL181W 1521 nt8.11□□□□□ -1.11
TRA1P38811 AKR2YOR034C 2250 nt8.1□□□□□ -1.11
TRA1P38811 LYS20YDL182W 1287 nt8.09□□□□□ -1.11
TRA1P38811 YCL074WYCL074W 927 nt8.08□□□□□ -1.12
TRA1P38811 YCR025CYCR025C 411 nt8.08□□□□□ -1.12
TRA1P38811 YMR210WYMR210W 1350 nt8.08□□□□□ -1.12
TRA1P38811 YBL086CYBL086C 1401 nt8.08□□□□□ -1.12
TRA1P38811 PCP1YGR101W 1041 nt8.08□□□□□ -1.12
TRA1P38811 HOG1YLR113W 1308 nt8.08□□□□□ -1.12
TRA1P38811 YPL247CYPL247C 1572 nt8.07□□□□□ -1.12
TRA1P38811 SWM1YDR260C 513 nt8.07□□□□□ -1.12
TRA1P38811 UTR1YJR049C 1593 nt8.07□□□□□ -1.12
TRA1P38811 YAL016C-AYAL016C-A 315 nt8.05□□□□□ -1.12
TRA1P38811 YMR262WYMR262W 942 nt8.04□□□□□ -1.12
TRA1P38811 tA(AGC)DtA(AGC)D 73 nt8.04□□□□□ -1.12
TRA1P38811 tA(AGC)FtA(AGC)F 73 nt8.04□□□□□ -1.12
TRA1P38811 tA(AGC)GtA(AGC)G 73 nt8.04□□□□□ -1.12
TRA1P38811 tA(AGC)HtA(AGC)H 73 nt8.04□□□□□ -1.12
TRA1P38811 tA(AGC)JtA(AGC)J 73 nt8.04□□□□□ -1.12
TRA1P38811 tA(AGC)K1tA(AGC)K1 73 nt8.04□□□□□ -1.12
TRA1P38811 tA(AGC)K2tA(AGC)K2 73 nt8.04□□□□□ -1.12
TRA1P38811 tA(AGC)LtA(AGC)L 73 nt8.04□□□□□ -1.12
TRA1P38811 tA(AGC)M1tA(AGC)M1 73 nt8.04□□□□□ -1.12
TRA1P38811 tA(AGC)M2tA(AGC)M2 73 nt8.04□□□□□ -1.12
TRA1P38811 tA(AGC)PtA(AGC)P 73 nt8.04□□□□□ -1.12
TRA1P38811 YER190C-AYER190C-A 576 nt8.03□□□□□ -1.12
TRA1P38811 YGR296C-AYGR296C-A 576 nt8.03□□□□□ -1.12
TRA1P38811 YML133W-AYML133W-A 576 nt8.03□□□□□ -1.12
TRA1P38811 YNL339W-AYNL339W-A 576 nt8.03□□□□□ -1.12
TRA1P38811 YPL283W-AYPL283W-A 576 nt8.03□□□□□ -1.12
TRA1P38811 SSN3YPL042C 1668 nt8.03□□□□□ -1.12
TRA1P38811 SNF1YDR477W 1902 nt8.02□□□□□ -1.13
TRA1P38811 FUR4YBR021W 1902 nt8.02□□□□□ -1.13
TRA1P38811 TGA1tA(UGC)A 73 nt8.02□□□□□ -1.13
TRA1P38811 tA(UGC)EtA(UGC)E 73 nt8.02□□□□□ -1.13
TRA1P38811 tA(UGC)GtA(UGC)G 73 nt8.02□□□□□ -1.13
TRA1P38811 tA(UGC)LtA(UGC)L 73 nt8.02□□□□□ -1.13
TRA1P38811 tA(UGC)OtA(UGC)O 73 nt8.02□□□□□ -1.13
TRA1P38811 TOS1YBR162C 1368 nt8.02□□□□□ -1.13
TRA1P38811 YGR259CYGR259C 441 nt8.02□□□□□ -1.13
TRA1P38811 PRM5YIL117C 957 nt8.02□□□□□ -1.13
TRA1P38811 IGD1YFR017C 588 nt8.01□□□□□ -1.13
TRA1P38811 SDH8YBR269C 417 nt8.01□□□□□ -1.13
TRA1P38811 YMR007WYMR007W 381 nt7.99□□□□□ -1.13
TRA1P38811 DBP1YPL119C 1854 nt7.99□□□□□ -1.13
TRA1P38811 IPL1YPL209C 1104 nt7.99□□□□□ -1.13
TRA1P38811 GRH1YDR517W 1119 nt7.99□□□□□ -1.13
TRA1P38811 SED1YDR077W 1017 nt7.98□□□□□ -1.13
TRA1P38811 MHF1YOL086W-A 273 nt7.98□□□□□ -1.13
TRA1P38811 HIF1YLL022C 1158 nt7.98□□□□□ -1.13
TRA1P38811 YPR126CYPR126C 309 nt7.96□□□□□ -1.13
TRA1P38811 RTN2YDL204W 1182 nt7.95□□□□□ -1.14
TRA1P38811 PRE5YMR314W 705 nt7.94□□□□□ -1.14
TRA1P38811 NIF3YGL221C 867 nt7.92□□□□□ -1.14
TRA1P38811 UFO1YML088W 2007 nt7.91□□□□□ -1.14
TRA1P38811 MOB1YIL106W 945 nt7.91□□□□□ -1.14
TRA1P38811 HRA1HRA1 564 nt7.91□□□□□ -1.14
TRA1P38811 TPS1YBR126C 1488 nt7.91□□□□□ -1.14
TRA1P38811 MEP3YPR138C 1470 nt7.91□□□□□ -1.14
TRA1P38811 YKR005CYKR005C 1578 nt7.91□□□□□ -1.14
TRA1P38811 BAP3YDR046C 1815 nt7.9□□□□□ -1.14
TRA1P38811 IRC24YIR036C 792 nt7.9□□□□□ -1.14
TRA1P38811 CDD1YLR245C 429 nt7.9□□□□□ -1.14
TRA1P38811 ASP3-1YLR155C 1089 nt7.9□□□□□ -1.15
TRA1P38811 ASP3-2YLR157C 1089 nt7.9□□□□□ -1.15
TRA1P38811 ASP3-3YLR158C 1089 nt7.9□□□□□ -1.15
TRA1P38811 ASP3-4YLR160C 1089 nt7.9□□□□□ -1.15
TRA1P38811 OYE3YPL171C 1203 nt7.89□□□□□ -1.15
TRA1P38811 SPG1YGR236C 288 nt7.89□□□□□ -1.15
TRA1P38811 FLX1YIL134W 936 nt7.89□□□□□ -1.15
TRA1P38811 TOA2YKL058W 369 nt7.89□□□□□ -1.15
TRA1P38811 BNI5YNL166C 1347 nt7.89□□□□□ -1.15
TRA1P38811 tL(UAA)B1tL(UAA)B1 84 nt7.88□□□□□ -1.15
TRA1P38811 tL(UAA)B2tL(UAA)B2 84 nt7.88□□□□□ -1.15
TRA1P38811 tL(UAA)DtL(UAA)D 84 nt7.88□□□□□ -1.15
TRA1P38811 SUP51tL(UAA)J 84 nt7.88□□□□□ -1.15
TRA1P38811 tL(UAA)KtL(UAA)K 84 nt7.88□□□□□ -1.15
TRA1P38811 tL(UAA)LtL(UAA)L 84 nt7.88□□□□□ -1.15
TRA1P38811 tL(UAA)NtL(UAA)N 84 nt7.88□□□□□ -1.15
TRA1P38811 ADH3YMR083W 1128 nt7.87□□□□□ -1.15
TRA1P38811 DDI1YER143W 1287 nt7.86□□□□□ -1.15
TRA1P38811 NAS2YIL007C 663 nt7.86□□□□□ -1.15
TRA1P38811 NUC1YJL208C 990 nt7.86□□□□□ -1.15
TRA1P38811 YPL251WYPL251W 303 nt7.86□□□□□ -1.15
TRA1P38811 COS10YNR075W 1125 nt7.86□□□□□ -1.15
TRA1P38811 MSC1YML128C 1542 nt7.85□□□□□ -1.15
TRA1P38811 SPE2YOL052C 1191 nt7.85□□□□□ -1.15
TRA1P38811 RSC8YFR037C 1674 nt7.83□□□□□ -1.16
TRA1P38811 YMR103CYMR103C 363 nt7.83□□□□□ -1.16
TRA1P38811 LEU9YOR108W 1815 nt7.82□□□□□ -1.16
TRA1P38811 FCY1YPR062W 477 nt7.81□□□□□ -1.16
TRA1P38811 RAS2YNL098C 969 nt7.81□□□□□ -1.16
TRA1P38811 GND2YGR256W 1479 nt7.81□□□□□ -1.16
TRA1P38811 YDR510C-AYDR510C-A 117 nt7.8□□□□□ -1.16
TRA1P38811 FLR1YBR008C 1647 nt7.8□□□□□ -1.16
TRA1P38811 RPT5YOR117W 1305 nt7.8□□□□□ -1.16
TRA1P38811 LSM5YER146W 282 nt7.79□□□□□ -1.16
TRA1P38811 EDC2YER035W 438 nt7.77□□□□□ -1.17
Retrieved 100 of 7,029 protein–RNA pairs in 15.2 ms