Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 ALP1YNL270C 1722 nt8.54□□□□□ -1.04
PUB1P32588 LEU9YOR108W 1815 nt8.54□□□□□ -1.04
PUB1P32588 TOA2YKL058W 369 nt8.54□□□□□ -1.04 RIP-Chip
PUB1P32588 FIT3YOR383C 615 nt8.54□□□□□ -1.04
PUB1P32588 UFO1YML088W 2007 nt8.54□□□□□ -1.04
PUB1P32588 RBG1YAL036C 1110 nt8.53□□□□□ -1.04
PUB1P32588 ZTA1YBR046C 1005 nt8.53□□□□□ -1.04 RIP-Chip
PUB1P32588 AIM45YPR004C 1035 nt8.53□□□□□ -1.04
PUB1P32588 BRR1YPR057W 1026 nt8.53□□□□□ -1.04
PUB1P32588 YNR068CYNR068C 819 nt8.52□□□□□ -1.05
PUB1P32588 YOR325WYOR325W 474 nt8.52□□□□□ -1.05
PUB1P32588 HMT1YBR034C 1047 nt8.52□□□□□ -1.05
PUB1P32588 YPL251WYPL251W 303 nt8.52□□□□□ -1.05
PUB1P32588 OYE3YPL171C 1203 nt8.51□□□□□ -1.05
PUB1P32588 YGL114WYGL114W 2178 nt8.51□□□□□ -1.05
PUB1P32588 YJL118WYJL118W 660 nt8.5□□□□□ -1.05 RIP-Chip
PUB1P32588 PET8YNL003C 855 nt8.5□□□□□ -1.05 RIP-Chip
PUB1P32588 YNL067W-AYNL067W-A 147 nt8.5□□□□□ -1.05
PUB1P32588 YPL071CYPL071C 471 nt8.5□□□□□ -1.05
PUB1P32588 Q0142Q0142 177 nt8.49□□□□□ -1.05
PUB1P32588 RPS14BYJL191W 417 nt8.49□□□□□ -1.05 RIP-Chip
PUB1P32588 GND2YGR256W 1479 nt8.47□□□□□ -1.05
PUB1P32588 TRT2tT(CGU)K 72 nt8.47□□□□□ -1.05
PUB1P32588 OPI10YOL032W 741 nt8.47□□□□□ -1.05
PUB1P32588 HEL2YDR266C 1920 nt8.46□□□□□ -1.05
PUB1P32588 RBG2YGR173W 1107 nt8.46□□□□□ -1.06
PUB1P32588 CCT2YIL142W 1584 nt8.45□□□□□ -1.06
PUB1P32588 MEP3YPR138C 1470 nt8.45□□□□□ -1.06 RIP-Chip
PUB1P32588 SAM2YDR502C 1155 nt8.43□□□□□ -1.06
PUB1P32588 YHM2YMR241W 945 nt8.43□□□□□ -1.06 RIP-Chip
PUB1P32588 COQ8YGL119W 1506 nt8.43□□□□□ -1.06
PUB1P32588 YMR103CYMR103C 363 nt8.42□□□□□ -1.06 RIP-Chip
PUB1P32588 SPP2YOR148C 558 nt8.41□□□□□ -1.06
PUB1P32588 ARO8YGL202W 1503 nt8.4□□□□□ -1.06
PUB1P32588 HIS2YFR025C 1008 nt8.4□□□□□ -1.06
PUB1P32588 URE2YNL229C 1065 nt8.39□□□□□ -1.07
PUB1P32588 RSC8YFR037C 1674 nt8.39□□□□□ -1.07
PUB1P32588 BET2YPR176C 978 nt8.38□□□□□ -1.07 RIP-Chip
PUB1P32588 TSC10YBR265W 963 nt8.38□□□□□ -1.07
PUB1P32588 FMS1YMR020W 1527 nt8.38□□□□□ -1.07
PUB1P32588 KES1YPL145C 1305 nt8.37□□□□□ -1.07 RIP-Chip
PUB1P32588 VPS62YGR141W 1404 nt8.37□□□□□ -1.07 RIP-Chip
PUB1P32588 ACH1YBL015W 1581 nt8.35□□□□□ -1.07
PUB1P32588 UGP1YKL035W 1500 nt8.35□□□□□ -1.07
PUB1P32588 YPS3YLR121C 1527 nt8.34□□□□□ -1.07 RIP-Chip
PUB1P32588 LSB6YJL100W 1824 nt8.34□□□□□ -1.07
PUB1P32588 FLR1YBR008C 1647 nt8.34□□□□□ -1.07 RIP-Chip
PUB1P32588 SEC61YLR378C 1443 nt8.34□□□□□ -1.07 RIP-Chip
PUB1P32588 SGA1YIL099W 1650 nt8.34□□□□□ -1.08
PUB1P32588 Q0255Q0255 1419 nt8.33□□□□□ -1.08
PUB1P32588 YLR279WYLR279W 390 nt8.33□□□□□ -1.08
PUB1P32588 UGA4YDL210W 1716 nt8.32□□□□□ -1.08
PUB1P32588 YDL086WYDL086W 822 nt8.32□□□□□ -1.08
PUB1P32588 OXA1YER154W 1209 nt8.32□□□□□ -1.08 RIP-Chip
PUB1P32588 YMR226CYMR226C 804 nt8.32□□□□□ -1.08
PUB1P32588 SDH5YOL071W 489 nt8.32□□□□□ -1.08 RIP-Chip
PUB1P32588 DLD2YDL178W 1593 nt8.31□□□□□ -1.08
PUB1P32588 SSN3YPL042C 1668 nt8.31□□□□□ -1.08 RIP-Chip
PUB1P32588 YMR209CYMR209C 1374 nt8.31□□□□□ -1.08 RIP-Chip
PUB1P32588 MSB4YOL112W 1479 nt8.3□□□□□ -1.08
PUB1P32588 QDR2YIL121W 1629 nt8.29□□□□□ -1.08 RIP-Chip
PUB1P32588 YGR012WYGR012W 1182 nt8.29□□□□□ -1.08
PUB1P32588 DIG1YPL049C 1359 nt8.27□□□□□ -1.09
PUB1P32588 APT2YDR441C 546 nt8.27□□□□□ -1.09 RIP-Chip
PUB1P32588 AIR1YIL079C 1083 nt8.27□□□□□ -1.09 RIP-Chip
PUB1P32588 YPL168WYPL168W 1293 nt8.27□□□□□ -1.09
PUB1P32588 Q0017Q0017 162 nt8.27□□□□□ -1.09
PUB1P32588 MAE1YKL029C 2010 nt8.26□□□□□ -1.09
PUB1P32588 ATP6Q0085 780 nt8.26□□□□□ -1.09 RIP-Chip
PUB1P32588 BNI5YNL166C 1347 nt8.26□□□□□ -1.09
PUB1P32588 YER188WYER188W 720 nt8.25□□□□□ -1.09
PUB1P32588 YGL188CYGL188C 174 nt8.25□□□□□ -1.09 RIP-Chip
PUB1P32588 YLR111WYLR111W 333 nt8.25□□□□□ -1.09
PUB1P32588 NEM1YHR004C 1341 nt8.25□□□□□ -1.09
PUB1P32588 FCY21YER060W 1587 nt8.24□□□□□ -1.09 RIP-Chip
PUB1P32588 ZAP1YJL056C 2643 nt8.23□□□□□ -1.09
PUB1P32588 YJR154WYJR154W 1041 nt8.23□□□□□ -1.09
PUB1P32588 PHO23YNL097C 993 nt8.23□□□□□ -1.09
PUB1P32588 KTR3YBR205W 1215 nt8.23□□□□□ -1.09
PUB1P32588 MSC1YML128C 1542 nt8.23□□□□□ -1.09
PUB1P32588 HEM13YDR044W 987 nt8.22□□□□□ -1.09 RIP-Chip
PUB1P32588 YJL107CYJL107C 1164 nt8.22□□□□□ -1.09
PUB1P32588 THP3YPR045C 1413 nt8.21□□□□□ -1.09
PUB1P32588 OSH7YHR001W 1314 nt8.21□□□□□ -1.1
PUB1P32588 GID8YMR135C 1368 nt8.21□□□□□ -1.1
PUB1P32588 FUB1YCR076C 753 nt8.2□□□□□ -1.1
PUB1P32588 CAB5YDR196C 726 nt8.2□□□□□ -1.1
PUB1P32588 YPL041CYPL041C 624 nt8.2□□□□□ -1.1 RIP-Chip
PUB1P32588 LSM12YHR121W 564 nt8.19□□□□□ -1.1
PUB1P32588 NUC1YJL208C 990 nt8.19□□□□□ -1.1
PUB1P32588 YPL222C-AYPL222C-A 246 nt8.19□□□□□ -1.1
PUB1P32588 YOR169CYOR169C 465 nt8.18□□□□□ -1.1
PUB1P32588 RAD23YEL037C 1197 nt8.17□□□□□ -1.1
PUB1P32588 YLR437C-AYLR437C-A 228 nt8.17□□□□□ -1.1
PUB1P32588 STD1YOR047C 1335 nt8.17□□□□□ -1.1
PUB1P32588 PRY1YJL079C 900 nt8.16□□□□□ -1.1 RIP-Chip
PUB1P32588 PSD1YNL169C 1503 nt8.16□□□□□ -1.1
PUB1P32588 YKL133CYKL133C 1392 nt8.15□□□□□ -1.1
PUB1P32588 CSM1YCR086W 573 nt8.15□□□□□ -1.1
PUB1P32588 YEL074WYEL074W 339 nt8.15□□□□□ -1.1 RIP-Chip
Retrieved 100 of 7,029 protein–RNA pairs in 26.7 ms