Protein–RNA interactions for Protein: A0A1B0GSD2

Slc6a21, Transporter, mousemouse

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a21A0A1B0GSD2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Slc6a21A0A1B0GSD2 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Slc6a21A0A1B0GSD2 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC27.75■■■□□ 2.03
Slc6a21A0A1B0GSD2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Slc6a21A0A1B0GSD2 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Slc6a21A0A1B0GSD2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Slc6a21A0A1B0GSD2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
Slc6a21A0A1B0GSD2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC27.73■■■□□ 2.03
Slc6a21A0A1B0GSD2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Slc6a21A0A1B0GSD2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Slc6a21A0A1B0GSD2 Nkain2-201ENSMUST00000092602 558 ntBASIC27.71■■■□□ 2.03
Slc6a21A0A1B0GSD2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Slc6a21A0A1B0GSD2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Slc6a21A0A1B0GSD2 Gm30346-201ENSMUST00000218641 1699 ntBASIC27.68■■■□□ 2.02
Slc6a21A0A1B0GSD2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Slc6a21A0A1B0GSD2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Slc6a21A0A1B0GSD2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC27.68■■■□□ 2.02
Slc6a21A0A1B0GSD2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Slc6a21A0A1B0GSD2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Slc6a21A0A1B0GSD2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Slc6a21A0A1B0GSD2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
Slc6a21A0A1B0GSD2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC27.65■■■□□ 2.02
Slc6a21A0A1B0GSD2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC27.65■■■□□ 2.02
Slc6a21A0A1B0GSD2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Slc6a21A0A1B0GSD2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Slc6a21A0A1B0GSD2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Slc6a21A0A1B0GSD2 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC27.64■■■□□ 2.02
Slc6a21A0A1B0GSD2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Slc6a21A0A1B0GSD2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
Slc6a21A0A1B0GSD2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
Slc6a21A0A1B0GSD2 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.6■■■□□ 2.01
Slc6a21A0A1B0GSD2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Slc6a21A0A1B0GSD2 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Slc6a21A0A1B0GSD2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC27.59■■■□□ 2.01
Slc6a21A0A1B0GSD2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC27.59■■■□□ 2.01
Slc6a21A0A1B0GSD2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Slc6a21A0A1B0GSD2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Slc6a21A0A1B0GSD2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Slc6a21A0A1B0GSD2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC27.58■■■□□ 2
Slc6a21A0A1B0GSD2 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC27.56■■■□□ 2
Slc6a21A0A1B0GSD2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Slc6a21A0A1B0GSD2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
Slc6a21A0A1B0GSD2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Slc6a21A0A1B0GSD2 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC27.53■■■□□ 2
Slc6a21A0A1B0GSD2 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC27.52■■■□□ 2
Slc6a21A0A1B0GSD2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC27.5■■□□□ 1.99
Slc6a21A0A1B0GSD2 Gm7432-201ENSMUST00000210343 879 ntBASIC27.5■■□□□ 1.99
Slc6a21A0A1B0GSD2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.99
Slc6a21A0A1B0GSD2 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Slc6a21A0A1B0GSD2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Slc6a21A0A1B0GSD2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Slc6a21A0A1B0GSD2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Slc6a21A0A1B0GSD2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.43■■□□□ 1.98
Slc6a21A0A1B0GSD2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Slc6a21A0A1B0GSD2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
Slc6a21A0A1B0GSD2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Slc6a21A0A1B0GSD2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC27.42■■□□□ 1.98
Slc6a21A0A1B0GSD2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Slc6a21A0A1B0GSD2 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
Slc6a21A0A1B0GSD2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
Slc6a21A0A1B0GSD2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Slc6a21A0A1B0GSD2 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.39■■□□□ 1.98
Slc6a21A0A1B0GSD2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Slc6a21A0A1B0GSD2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Slc6a21A0A1B0GSD2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Slc6a21A0A1B0GSD2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Slc6a21A0A1B0GSD2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
Slc6a21A0A1B0GSD2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC27.36■■□□□ 1.97
Slc6a21A0A1B0GSD2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Slc6a21A0A1B0GSD2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC27.35■■□□□ 1.97
Slc6a21A0A1B0GSD2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Slc6a21A0A1B0GSD2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Slc6a21A0A1B0GSD2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC27.33■■□□□ 1.97
Slc6a21A0A1B0GSD2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Slc6a21A0A1B0GSD2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Slc6a21A0A1B0GSD2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC27.31■■□□□ 1.96
Slc6a21A0A1B0GSD2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
Slc6a21A0A1B0GSD2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Slc6a21A0A1B0GSD2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Slc6a21A0A1B0GSD2 Gm11599-201ENSMUST00000118720 878 ntBASIC27.28■■□□□ 1.96
Slc6a21A0A1B0GSD2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
Slc6a21A0A1B0GSD2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Slc6a21A0A1B0GSD2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Slc6a21A0A1B0GSD2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC27.26■■□□□ 1.95
Slc6a21A0A1B0GSD2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC27.25■■□□□ 1.95
Slc6a21A0A1B0GSD2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC27.24■■□□□ 1.95
Slc6a21A0A1B0GSD2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Slc6a21A0A1B0GSD2 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Slc6a21A0A1B0GSD2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC27.21■■□□□ 1.95
Slc6a21A0A1B0GSD2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Slc6a21A0A1B0GSD2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Slc6a21A0A1B0GSD2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Slc6a21A0A1B0GSD2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC27.19■■□□□ 1.94
Slc6a21A0A1B0GSD2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC27.18■■□□□ 1.94
Slc6a21A0A1B0GSD2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Slc6a21A0A1B0GSD2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Slc6a21A0A1B0GSD2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Slc6a21A0A1B0GSD2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Slc6a21A0A1B0GSD2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC27.14■■□□□ 1.94
Slc6a21A0A1B0GSD2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC27.14■■□□□ 1.94
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms