Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV8-1A0A0A6YYK1 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV8-1A0A0A6YYK1 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
TRAV8-1A0A0A6YYK1 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV8-1A0A0A6YYK1 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV8-1A0A0A6YYK1 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV8-1A0A0A6YYK1 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV8-1A0A0A6YYK1 ZNRF2P1-201ENST00000441407 443 ntBASIC20.17■□□□□ 0.82
TRAV8-1A0A0A6YYK1 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV8-1A0A0A6YYK1 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV8-1A0A0A6YYK1 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
TRAV8-1A0A0A6YYK1 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV8-1A0A0A6YYK1 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV8-1A0A0A6YYK1 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TRAV8-1A0A0A6YYK1 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV8-1A0A0A6YYK1 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV8-1A0A0A6YYK1 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TRAV8-1A0A0A6YYK1 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV8-1A0A0A6YYK1 DYNLL1-208ENST00000550178 581 ntBASIC20.14■□□□□ 0.81
TRAV8-1A0A0A6YYK1 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV8-1A0A0A6YYK1 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV8-1A0A0A6YYK1 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV8-1A0A0A6YYK1 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.13■□□□□ 0.81
TRAV8-1A0A0A6YYK1 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV8-1A0A0A6YYK1 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV8-1A0A0A6YYK1 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV8-1A0A0A6YYK1 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV8-1A0A0A6YYK1 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV8-1A0A0A6YYK1 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
TRAV8-1A0A0A6YYK1 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV8-1A0A0A6YYK1 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
TRAV8-1A0A0A6YYK1 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV8-1A0A0A6YYK1 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV8-1A0A0A6YYK1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV8-1A0A0A6YYK1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
TRAV8-1A0A0A6YYK1 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV8-1A0A0A6YYK1 AL135925.1-201ENST00000605920 1701 ntBASIC20.1■□□□□ 0.81
TRAV8-1A0A0A6YYK1 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV8-1A0A0A6YYK1 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV8-1A0A0A6YYK1 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV8-1A0A0A6YYK1 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV8-1A0A0A6YYK1 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
TRAV8-1A0A0A6YYK1 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.09■□□□□ 0.81
TRAV8-1A0A0A6YYK1 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.09■□□□□ 0.81
TRAV8-1A0A0A6YYK1 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV8-1A0A0A6YYK1 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
TRAV8-1A0A0A6YYK1 EBPL-203ENST00000378270 579 ntTSL 2 BASIC20.08■□□□□ 0.81
TRAV8-1A0A0A6YYK1 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TRAV8-1A0A0A6YYK1 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAV8-1A0A0A6YYK1 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.07■□□□□ 0.8
TRAV8-1A0A0A6YYK1 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.07■□□□□ 0.8
TRAV8-1A0A0A6YYK1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
TRAV8-1A0A0A6YYK1 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV8-1A0A0A6YYK1 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV8-1A0A0A6YYK1 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV8-1A0A0A6YYK1 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TRAV8-1A0A0A6YYK1 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV8-1A0A0A6YYK1 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV8-1A0A0A6YYK1 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
TRAV8-1A0A0A6YYK1 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV8-1A0A0A6YYK1 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TRAV8-1A0A0A6YYK1 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TRAV8-1A0A0A6YYK1 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.01■□□□□ 0.79
TRAV8-1A0A0A6YYK1 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV8-1A0A0A6YYK1 AC142086.6-201ENST00000621154 1765 ntBASIC20■□□□□ 0.79
TRAV8-1A0A0A6YYK1 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TRAV8-1A0A0A6YYK1 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV8-1A0A0A6YYK1 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
TRAV8-1A0A0A6YYK1 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.99■□□□□ 0.79
TRAV8-1A0A0A6YYK1 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV8-1A0A0A6YYK1 AL031258.1-201ENST00000623562 325 ntBASIC19.99■□□□□ 0.79
TRAV8-1A0A0A6YYK1 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV8-1A0A0A6YYK1 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV8-1A0A0A6YYK1 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV8-1A0A0A6YYK1 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.97■□□□□ 0.79
TRAV8-1A0A0A6YYK1 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV8-1A0A0A6YYK1 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TRAV8-1A0A0A6YYK1 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV8-1A0A0A6YYK1 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV8-1A0A0A6YYK1 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV8-1A0A0A6YYK1 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV8-1A0A0A6YYK1 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV8-1A0A0A6YYK1 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.95■□□□□ 0.78
TRAV8-1A0A0A6YYK1 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.94■□□□□ 0.78
TRAV8-1A0A0A6YYK1 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC19.94■□□□□ 0.78
TRAV8-1A0A0A6YYK1 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC19.94■□□□□ 0.78
TRAV8-1A0A0A6YYK1 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TRAV8-1A0A0A6YYK1 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV8-1A0A0A6YYK1 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV8-1A0A0A6YYK1 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
TRAV8-1A0A0A6YYK1 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.92■□□□□ 0.78
TRAV8-1A0A0A6YYK1 AL139393.2-201ENST00000608721 2025 ntBASIC19.91■□□□□ 0.78
TRAV8-1A0A0A6YYK1 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV8-1A0A0A6YYK1 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV8-1A0A0A6YYK1 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TRAV8-1A0A0A6YYK1 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV8-1A0A0A6YYK1 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
TRAV8-1A0A0A6YYK1 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
TRAV8-1A0A0A6YYK1 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.88■□□□□ 0.77
TRAV8-1A0A0A6YYK1 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms