Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 CLU-201ENST00000316403 3080 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P04436 CAV1-202ENST00000393467 2628 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P04436 FMO1-201ENST00000354841 2160 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P04436 USP6-205ENST00000574788 8464 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P04436 LAMA1-201ENST00000389658 9657 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P04436 TPRKB-201ENST00000272424 748 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P04436 SLC25A14-202ENST00000339231 1062 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
P04436 SNORA5C-201ENST00000364902 137 ntBASIC9.63□□□□□ -0.87
P04436 ZNF669-203ENST00000366501 730 ntTSL 3 BASIC9.63□□□□□ -0.87
P04436 IGHV1-69-201ENST00000390633 412 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
P04436 SNORA48B-201ENST00000390912 135 ntBASIC9.63□□□□□ -0.87
P04436 ZNF816-204ENST00000391786 562 ntTSL 4 BASIC9.63□□□□□ -0.87
P04436 PDGFD-202ENST00000393158 3801 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P04436 SNAPC5P1-201ENST00000403621 301 ntBASIC9.63□□□□□ -0.87
P04436 TMEM211-201ENST00000407886 866 ntTSL 3 BASIC9.63□□□□□ -0.87
P04436 AC024937.1-201ENST00000429793 344 ntBASIC9.63□□□□□ -0.87
P04436 AC078842.1-201ENST00000438969 553 ntTSL 4 BASIC9.63□□□□□ -0.87
P04436 AL590483.1-201ENST00000441338 468 ntTSL 3 BASIC9.63□□□□□ -0.87
P04436 USP41-202ENST00000454608 1077 ntAPPRIS P5 TSL 5 BASIC9.63□□□□□ -0.87
P04436 RN7SL380P-201ENST00000461702 308 ntBASIC9.63□□□□□ -0.87
P04436 MTND6P3-201ENST00000520612 542 ntBASIC9.63□□□□□ -0.87
P04436 ZNF317P1-201ENST00000521453 1027 ntBASIC9.63□□□□□ -0.87
P04436 AC011092.1-201ENST00000533128 1047 ntBASIC9.63□□□□□ -0.87
P04436 AC012317.1-201ENST00000563611 534 ntTSL 4 BASIC9.63□□□□□ -0.87
P04436 AC007610.3-201ENST00000566879 934 ntBASIC9.63□□□□□ -0.87
P04436 AC004585.1-201ENST00000578280 1014 ntTSL 5 BASIC9.63□□□□□ -0.87
P04436 AC134978.1-201ENST00000579480 788 ntTSL 3 BASIC9.63□□□□□ -0.87
P04436 AC022966.2-201ENST00000587434 367 ntBASIC9.63□□□□□ -0.87
P04436 Metazoa_SRP.149-201ENST00000613165 297 ntBASIC9.63□□□□□ -0.87
P04436 AC024475.3-205ENST00000634991 481 ntTSL 3 BASIC9.63□□□□□ -0.87
P04436 ZBTB37-204ENST00000427304 2300 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
P04436 MAPK8-205ENST00000374182 5638 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
P04436 POLDIP3-203ENST00000348657 3323 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
P04436 SLC24A4-205ENST00000532405 9950 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
P04436 AL022476.1-201ENST00000443063 2083 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
P04436 ZNF473-202ENST00000391821 4715 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
P04436 MUC13-205ENST00000616727 2879 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
P04436 CAGE1-206ENST00000502583 3284 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
P04436 SLC35F6-201ENST00000344420 3898 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P04436 PCDHAC1-202ENST00000409700 4077 ntAPPRIS ALT2 BASIC9.63□□□□□ -0.87
P04436 AC108062.1-203ENST00000511497 2012 ntTSL 2 BASIC9.63□□□□□ -0.87
P04436 FAM181A-AS1-202ENST00000554742 2402 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
P04436 BCAR3-204ENST00000370247 2827 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
P04436 AACSP1-201ENST00000503486 2822 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
P04436 ZBTB1-203ENST00000554015 2825 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P04436 ZDHHC22-201ENST00000319374 3408 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P04436 USO1-204ENST00000514213 4034 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P04436 EIF1AD-204ENST00000526451 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
P04436 C8B-206ENST00000543257 2382 ntTSL 2 BASIC9.63□□□□□ -0.87
P04436 PHF8-201ENST00000322659 2921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
P04436 AMPD2-201ENST00000256578 3899 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
P04436 EXOC2-201ENST00000230449 4449 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P04436 FNBP1L-202ENST00000271234 4212 ntAPPRIS P4 TSL 5 BASIC9.62□□□□□ -0.87
P04436 PGA4-201ENST00000378149 1748 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P04436 REV3L-202ENST00000368802 10701 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P04436 OSBPL7-201ENST00000007414 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P04436 CXCR1-201ENST00000295683 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P04436 FBXO9-202ENST00000323557 3418 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P04436 IST1-202ENST00000378798 2255 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
P04436 ANKRD66-202ENST00000565422 1346 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
P04436 COL11A1-201ENST00000353414 7173 ntAPPRIS ALT1 TSL 5 BASIC9.62□□□□□ -0.87
P04436 FMN1-201ENST00000320930 3930 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
P04436 MEIS2-202ENST00000338564 4829 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
P04436 MEIS2-222ENST00000561208 4822 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
P04436 LINC00661-204ENST00000549354 3340 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
P04436 GRM8-203ENST00000358373 3850 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P04436 IKZF3-216ENST00000583368 1456 ntTSL 2 BASIC9.62□□□□□ -0.87
P04436 SPATA31E2P-201ENST00000554414 4965 ntBASIC9.62□□□□□ -0.87
P04436 PAX6-208ENST00000379132 2576 ntAPPRIS ALT1 TSL 5 BASIC9.62□□□□□ -0.87
P04436 ARHGAP30-203ENST00000368016 3482 ntTSL 5 BASIC9.62□□□□□ -0.87
P04436 LINC01913-201ENST00000398796 1810 ntTSL 2 BASIC9.62□□□□□ -0.87
P04436 IQCF2-201ENST00000333127 578 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P04436 MAP3K7CL-204ENST00000399925 692 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P04436 RPL36A-HNRNPH2-202ENST00000409338 572 ntTSL 4 BASIC9.62□□□□□ -0.87
P04436 AL450226.1-201ENST00000414776 710 ntTSL 2 BASIC9.62□□□□□ -0.87
P04436 OR11M1P-201ENST00000415975 895 ntBASIC9.62□□□□□ -0.87
P04436 FGF1-208ENST00000419524 683 ntAPPRIS P1 TSL 4 BASIC9.62□□□□□ -0.87
P04436 AKR1B1P4-201ENST00000426552 922 ntBASIC9.62□□□□□ -0.87
P04436 FAM231A-201ENST00000434336 510 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
P04436 AL132671.2-201ENST00000467125 930 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
P04436 LINC02214-201ENST00000504419 707 ntTSL 3 BASIC9.62□□□□□ -0.87
P04436 AC025171.2-202ENST00000505541 402 ntTSL 5 BASIC9.62□□□□□ -0.87
P04436 AC083906.3-201ENST00000509201 466 ntTSL 3 BASIC9.62□□□□□ -0.87
P04436 AC067904.1-201ENST00000522530 1225 ntBASIC9.62□□□□□ -0.87
P04436 CD3E-204ENST00000528600 1289 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
P04436 AP000785.2-201ENST00000531538 388 ntTSL 3 BASIC9.62□□□□□ -0.87
P04436 AL132780.3-201ENST00000555074 835 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
P04436 LINC01588-209ENST00000556019 534 ntTSL 3 BASIC9.62□□□□□ -0.87
P04436 B2M-208ENST00000559916 1081 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
P04436 ARL2BP-202ENST00000562023 547 ntTSL 3 BASIC9.62□□□□□ -0.87
P04436 MIR762HG-202ENST00000565573 1125 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
P04436 LINC00564-201ENST00000567258 1119 ntBASIC9.62□□□□□ -0.87
P04436 AC129507.2-201ENST00000572499 748 ntTSL 3 BASIC9.62□□□□□ -0.87
P04436 RN7SL693P-201ENST00000579576 279 ntBASIC9.62□□□□□ -0.87
P04436 AC005277.1-201ENST00000582915 335 ntTSL 5 BASIC9.62□□□□□ -0.87
P04436 RN7SL262P-201ENST00000584590 294 ntBASIC9.62□□□□□ -0.87
P04436 AL359091.3-201ENST00000609315 573 ntBASIC9.62□□□□□ -0.87
P04436 AC233724.15-201ENST00000621430 236 ntBASIC9.62□□□□□ -0.87
P04436 FAM231C-201ENST00000624031 510 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
P04436 OR2F1-202ENST00000624504 1089 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 150.7 ms