Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
LINC01558Q9Y6Z2 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC10.96□□□□□ -0.66
LINC01558Q9Y6Z2 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01558Q9Y6Z2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01558Q9Y6Z2 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
LINC01558Q9Y6Z2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01558Q9Y6Z2 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01558Q9Y6Z2 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01558Q9Y6Z2 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.66
LINC01558Q9Y6Z2 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01558Q9Y6Z2 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01558Q9Y6Z2 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01558Q9Y6Z2 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
LINC01558Q9Y6Z2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01558Q9Y6Z2 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01558Q9Y6Z2 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01558Q9Y6Z2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01558Q9Y6Z2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC10.96□□□□□ -0.66
LINC01558Q9Y6Z2 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01558Q9Y6Z2 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC10.96□□□□□ -0.66
LINC01558Q9Y6Z2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01558Q9Y6Z2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
LINC01558Q9Y6Z2 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01558Q9Y6Z2 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01558Q9Y6Z2 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01558Q9Y6Z2 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC01558Q9Y6Z2 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01558Q9Y6Z2 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01558Q9Y6Z2 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01558Q9Y6Z2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01558Q9Y6Z2 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01558Q9Y6Z2 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01558Q9Y6Z2 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
LINC01558Q9Y6Z2 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01558Q9Y6Z2 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01558Q9Y6Z2 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC01558Q9Y6Z2 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC10.95□□□□□ -0.66
LINC01558Q9Y6Z2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC01558Q9Y6Z2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01558Q9Y6Z2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01558Q9Y6Z2 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
LINC01558Q9Y6Z2 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
LINC01558Q9Y6Z2 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01558Q9Y6Z2 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01558Q9Y6Z2 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01558Q9Y6Z2 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01558Q9Y6Z2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01558Q9Y6Z2 AC093503.3-201ENST00000624917 2352 ntBASIC10.95□□□□□ -0.66
LINC01558Q9Y6Z2 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01558Q9Y6Z2 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01558Q9Y6Z2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01558Q9Y6Z2 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
LINC01558Q9Y6Z2 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC01558Q9Y6Z2 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01558Q9Y6Z2 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
LINC01558Q9Y6Z2 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC01558Q9Y6Z2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC01558Q9Y6Z2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01558Q9Y6Z2 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC01558Q9Y6Z2 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC10.94□□□□□ -0.66
LINC01558Q9Y6Z2 AL133373.2-201ENST00000623187 2828 ntBASIC10.94□□□□□ -0.66
LINC01558Q9Y6Z2 PEX7-203ENST00000541292 945 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC01558Q9Y6Z2 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01558Q9Y6Z2 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC10.94□□□□□ -0.66
LINC01558Q9Y6Z2 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01558Q9Y6Z2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01558Q9Y6Z2 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01558Q9Y6Z2 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01558Q9Y6Z2 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
LINC01558Q9Y6Z2 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01558Q9Y6Z2 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01558Q9Y6Z2 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
LINC01558Q9Y6Z2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01558Q9Y6Z2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01558Q9Y6Z2 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC01558Q9Y6Z2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC10.94□□□□□ -0.66
LINC01558Q9Y6Z2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01558Q9Y6Z2 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01558Q9Y6Z2 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01558Q9Y6Z2 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
LINC01558Q9Y6Z2 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01558Q9Y6Z2 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01558Q9Y6Z2 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01558Q9Y6Z2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01558Q9Y6Z2 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01558Q9Y6Z2 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01558Q9Y6Z2 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01558Q9Y6Z2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01558Q9Y6Z2 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
LINC01558Q9Y6Z2 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01558Q9Y6Z2 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC10.93□□□□□ -0.66
LINC01558Q9Y6Z2 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01558Q9Y6Z2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC01558Q9Y6Z2 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC01558Q9Y6Z2 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01558Q9Y6Z2 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC01558Q9Y6Z2 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
LINC01558Q9Y6Z2 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01558Q9Y6Z2 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01558Q9Y6Z2 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms