Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC25.12■■□□□ 1.61
DDX49Q9Y6V7 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC25.12■■□□□ 1.61
DDX49Q9Y6V7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC25.12■■□□□ 1.61
DDX49Q9Y6V7 TERF1P2-201ENST00000583350 1212 ntBASIC25.12■■□□□ 1.61
DDX49Q9Y6V7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC25.12■■□□□ 1.61
DDX49Q9Y6V7 AL137784.2-201ENST00000607332 1000 ntBASIC25.12■■□□□ 1.61
DDX49Q9Y6V7 AC105233.4-201ENST00000642045 216 ntBASIC25.12■■□□□ 1.61
DDX49Q9Y6V7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
DDX49Q9Y6V7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
DDX49Q9Y6V7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
DDX49Q9Y6V7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC25.12■■□□□ 1.61
DDX49Q9Y6V7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
DDX49Q9Y6V7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
DDX49Q9Y6V7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
DDX49Q9Y6V7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
DDX49Q9Y6V7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
DDX49Q9Y6V7 AC004911.1-201ENST00000416316 871 ntBASIC25.11■■□□□ 1.61
DDX49Q9Y6V7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC25.11■■□□□ 1.61
DDX49Q9Y6V7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC25.11■■□□□ 1.61
DDX49Q9Y6V7 AP005435.1-201ENST00000529293 1178 ntBASIC25.11■■□□□ 1.61
DDX49Q9Y6V7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
DDX49Q9Y6V7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
DDX49Q9Y6V7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC25.11■■□□□ 1.61
DDX49Q9Y6V7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
DDX49Q9Y6V7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
DDX49Q9Y6V7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
DDX49Q9Y6V7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC25.11■■□□□ 1.61
DDX49Q9Y6V7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
DDX49Q9Y6V7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
DDX49Q9Y6V7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC25.1■■□□□ 1.61
DDX49Q9Y6V7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
DDX49Q9Y6V7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC25.1■■□□□ 1.61
DDX49Q9Y6V7 NTF6G-201ENST00000591094 616 ntBASIC25.1■■□□□ 1.61
DDX49Q9Y6V7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC25.1■■□□□ 1.61
DDX49Q9Y6V7 FEM1AP4-201ENST00000443167 1987 ntBASIC25.1■■□□□ 1.61
DDX49Q9Y6V7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
DDX49Q9Y6V7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
DDX49Q9Y6V7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
DDX49Q9Y6V7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC25.1■■□□□ 1.61
DDX49Q9Y6V7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
DDX49Q9Y6V7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
DDX49Q9Y6V7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
DDX49Q9Y6V7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
DDX49Q9Y6V7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
DDX49Q9Y6V7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
DDX49Q9Y6V7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
DDX49Q9Y6V7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
DDX49Q9Y6V7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
DDX49Q9Y6V7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
DDX49Q9Y6V7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
DDX49Q9Y6V7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
DDX49Q9Y6V7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC25.09■■□□□ 1.61
DDX49Q9Y6V7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
DDX49Q9Y6V7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
DDX49Q9Y6V7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC25.09■■□□□ 1.61
DDX49Q9Y6V7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC25.09■■□□□ 1.61
DDX49Q9Y6V7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC25.09■■□□□ 1.61
DDX49Q9Y6V7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
DDX49Q9Y6V7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
DDX49Q9Y6V7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
DDX49Q9Y6V7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
DDX49Q9Y6V7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
DDX49Q9Y6V7 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
DDX49Q9Y6V7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
DDX49Q9Y6V7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
DDX49Q9Y6V7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
DDX49Q9Y6V7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
DDX49Q9Y6V7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
DDX49Q9Y6V7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC25.08■■□□□ 1.61
DDX49Q9Y6V7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
DDX49Q9Y6V7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC25.08■■□□□ 1.61
DDX49Q9Y6V7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC25.08■■□□□ 1.61
DDX49Q9Y6V7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
DDX49Q9Y6V7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC25.08■■□□□ 1.61
DDX49Q9Y6V7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC25.08■■□□□ 1.61
DDX49Q9Y6V7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
DDX49Q9Y6V7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
DDX49Q9Y6V7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC25.08■■□□□ 1.61
DDX49Q9Y6V7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
DDX49Q9Y6V7 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
DDX49Q9Y6V7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
DDX49Q9Y6V7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC25.08■■□□□ 1.61
DDX49Q9Y6V7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
DDX49Q9Y6V7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
DDX49Q9Y6V7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
DDX49Q9Y6V7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
DDX49Q9Y6V7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
DDX49Q9Y6V7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
DDX49Q9Y6V7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
DDX49Q9Y6V7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC25.07■■□□□ 1.6
DDX49Q9Y6V7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
DDX49Q9Y6V7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC25.07■■□□□ 1.6
DDX49Q9Y6V7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
DDX49Q9Y6V7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
DDX49Q9Y6V7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
DDX49Q9Y6V7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC25.07■■□□□ 1.6
DDX49Q9Y6V7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC25.07■■□□□ 1.6
DDX49Q9Y6V7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
DDX49Q9Y6V7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC25.07■■□□□ 1.6
DDX49Q9Y6V7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms