Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CSNK1G3Q9Y6M4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.6■□□□□ 0.89
CSNK1G3Q9Y6M4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSNK1G3Q9Y6M4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CSNK1G3Q9Y6M4 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.6■□□□□ 0.89
CSNK1G3Q9Y6M4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.6■□□□□ 0.89
CSNK1G3Q9Y6M4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.6■□□□□ 0.89
CSNK1G3Q9Y6M4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CSNK1G3Q9Y6M4 AC092118.2-201ENST00000613495 667 ntBASIC20.6■□□□□ 0.89
CSNK1G3Q9Y6M4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CSNK1G3Q9Y6M4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CSNK1G3Q9Y6M4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CSNK1G3Q9Y6M4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.6■□□□□ 0.89
CSNK1G3Q9Y6M4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
CSNK1G3Q9Y6M4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSNK1G3Q9Y6M4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSNK1G3Q9Y6M4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSNK1G3Q9Y6M4 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CSNK1G3Q9Y6M4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CSNK1G3Q9Y6M4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.59■□□□□ 0.89
CSNK1G3Q9Y6M4 AC098934.4-201ENST00000564127 592 ntBASIC20.59■□□□□ 0.89
CSNK1G3Q9Y6M4 AC016405.3-201ENST00000607710 860 ntBASIC20.59■□□□□ 0.89
CSNK1G3Q9Y6M4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.59■□□□□ 0.89
CSNK1G3Q9Y6M4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CSNK1G3Q9Y6M4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.59■□□□□ 0.89
CSNK1G3Q9Y6M4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.59■□□□□ 0.89
CSNK1G3Q9Y6M4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CSNK1G3Q9Y6M4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
CSNK1G3Q9Y6M4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CSNK1G3Q9Y6M4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CSNK1G3Q9Y6M4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CSNK1G3Q9Y6M4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
CSNK1G3Q9Y6M4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CSNK1G3Q9Y6M4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CSNK1G3Q9Y6M4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CSNK1G3Q9Y6M4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CSNK1G3Q9Y6M4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.58■□□□□ 0.89
CSNK1G3Q9Y6M4 FAM201B-201ENST00000458407 597 ntBASIC20.58■□□□□ 0.89
CSNK1G3Q9Y6M4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.58■□□□□ 0.89
CSNK1G3Q9Y6M4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.58■□□□□ 0.89
CSNK1G3Q9Y6M4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.58■□□□□ 0.89
CSNK1G3Q9Y6M4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.58■□□□□ 0.89
CSNK1G3Q9Y6M4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.88
CSNK1G3Q9Y6M4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.58■□□□□ 0.88
CSNK1G3Q9Y6M4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.58■□□□□ 0.88
CSNK1G3Q9Y6M4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK1G3Q9Y6M4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK1G3Q9Y6M4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK1G3Q9Y6M4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK1G3Q9Y6M4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.57■□□□□ 0.88
CSNK1G3Q9Y6M4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK1G3Q9Y6M4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.57■□□□□ 0.88
CSNK1G3Q9Y6M4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.57■□□□□ 0.88
CSNK1G3Q9Y6M4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK1G3Q9Y6M4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.57■□□□□ 0.88
CSNK1G3Q9Y6M4 AC093787.1-201ENST00000450396 207 ntBASIC20.57■□□□□ 0.88
CSNK1G3Q9Y6M4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.57■□□□□ 0.88
CSNK1G3Q9Y6M4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.57■□□□□ 0.88
CSNK1G3Q9Y6M4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK1G3Q9Y6M4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK1G3Q9Y6M4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.57■□□□□ 0.88
CSNK1G3Q9Y6M4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.57■□□□□ 0.88
CSNK1G3Q9Y6M4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK1G3Q9Y6M4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CSNK1G3Q9Y6M4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1G3Q9Y6M4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CSNK1G3Q9Y6M4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1G3Q9Y6M4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1G3Q9Y6M4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1G3Q9Y6M4 AC092053.2-201ENST00000640557 1818 ntBASIC20.56■□□□□ 0.88
CSNK1G3Q9Y6M4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CSNK1G3Q9Y6M4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CSNK1G3Q9Y6M4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1G3Q9Y6M4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.56■□□□□ 0.88
CSNK1G3Q9Y6M4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.56■□□□□ 0.88
CSNK1G3Q9Y6M4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CSNK1G3Q9Y6M4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CSNK1G3Q9Y6M4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1G3Q9Y6M4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.56■□□□□ 0.88
CSNK1G3Q9Y6M4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1G3Q9Y6M4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1G3Q9Y6M4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1G3Q9Y6M4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CSNK1G3Q9Y6M4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSNK1G3Q9Y6M4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CSNK1G3Q9Y6M4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSNK1G3Q9Y6M4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSNK1G3Q9Y6M4 AL117328.2-201ENST00000624617 1940 ntBASIC20.55■□□□□ 0.88
CSNK1G3Q9Y6M4 AC003102.1-202ENST00000563394 1796 ntBASIC20.55■□□□□ 0.88
CSNK1G3Q9Y6M4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.55■□□□□ 0.88
CSNK1G3Q9Y6M4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.55■□□□□ 0.88
CSNK1G3Q9Y6M4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.55■□□□□ 0.88
CSNK1G3Q9Y6M4 MIR4651-201ENST00000582622 73 ntBASIC20.55■□□□□ 0.88
CSNK1G3Q9Y6M4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.55■□□□□ 0.88
CSNK1G3Q9Y6M4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CSNK1G3Q9Y6M4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CSNK1G3Q9Y6M4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CSNK1G3Q9Y6M4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CSNK1G3Q9Y6M4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSNK1G3Q9Y6M4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms