Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
AP4B1Q9Y6B7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
AP4B1Q9Y6B7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
AP4B1Q9Y6B7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
AP4B1Q9Y6B7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.08■□□□□ 0.8
AP4B1Q9Y6B7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
AP4B1Q9Y6B7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.07■□□□□ 0.8
AP4B1Q9Y6B7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
AP4B1Q9Y6B7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
AP4B1Q9Y6B7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
AP4B1Q9Y6B7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
AP4B1Q9Y6B7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
AP4B1Q9Y6B7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
AP4B1Q9Y6B7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
AP4B1Q9Y6B7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.07■□□□□ 0.8
AP4B1Q9Y6B7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.07■□□□□ 0.8
AP4B1Q9Y6B7 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.07■□□□□ 0.8
AP4B1Q9Y6B7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
AP4B1Q9Y6B7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
AP4B1Q9Y6B7 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.07■□□□□ 0.8
AP4B1Q9Y6B7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP4B1Q9Y6B7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP4B1Q9Y6B7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP4B1Q9Y6B7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.06■□□□□ 0.8
AP4B1Q9Y6B7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP4B1Q9Y6B7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP4B1Q9Y6B7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP4B1Q9Y6B7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP4B1Q9Y6B7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP4B1Q9Y6B7 EDA-201ENST00000338901 1233 ntBASIC20.06■□□□□ 0.8
AP4B1Q9Y6B7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.06■□□□□ 0.8
AP4B1Q9Y6B7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP4B1Q9Y6B7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP4B1Q9Y6B7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
AP4B1Q9Y6B7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.06■□□□□ 0.8
AP4B1Q9Y6B7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP4B1Q9Y6B7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP4B1Q9Y6B7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
AP4B1Q9Y6B7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP4B1Q9Y6B7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP4B1Q9Y6B7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
AP4B1Q9Y6B7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.05■□□□□ 0.8
AP4B1Q9Y6B7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP4B1Q9Y6B7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
AP4B1Q9Y6B7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
AP4B1Q9Y6B7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP4B1Q9Y6B7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.05■□□□□ 0.8
AP4B1Q9Y6B7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP4B1Q9Y6B7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.05■□□□□ 0.8
AP4B1Q9Y6B7 MIR4767-201ENST00000582827 78 ntBASIC20.05■□□□□ 0.8
AP4B1Q9Y6B7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
AP4B1Q9Y6B7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.05■□□□□ 0.8
AP4B1Q9Y6B7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
AP4B1Q9Y6B7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
AP4B1Q9Y6B7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
AP4B1Q9Y6B7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
AP4B1Q9Y6B7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
AP4B1Q9Y6B7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP4B1Q9Y6B7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
AP4B1Q9Y6B7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.04■□□□□ 0.8
AP4B1Q9Y6B7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.04■□□□□ 0.8
AP4B1Q9Y6B7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
AP4B1Q9Y6B7 AC005837.3-201ENST00000612163 286 ntBASIC20.04■□□□□ 0.8
AP4B1Q9Y6B7 AL355001.2-201ENST00000620617 1191 ntBASIC20.04■□□□□ 0.8
AP4B1Q9Y6B7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP4B1Q9Y6B7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
AP4B1Q9Y6B7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP4B1Q9Y6B7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.04■□□□□ 0.8
AP4B1Q9Y6B7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
AP4B1Q9Y6B7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP4B1Q9Y6B7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP4B1Q9Y6B7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP4B1Q9Y6B7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
AP4B1Q9Y6B7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP4B1Q9Y6B7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP4B1Q9Y6B7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.04■□□□□ 0.8
AP4B1Q9Y6B7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP4B1Q9Y6B7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
AP4B1Q9Y6B7 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
AP4B1Q9Y6B7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
AP4B1Q9Y6B7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP4B1Q9Y6B7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.03■□□□□ 0.8
AP4B1Q9Y6B7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP4B1Q9Y6B7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP4B1Q9Y6B7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
AP4B1Q9Y6B7 AC133637.1-201ENST00000624115 1537 ntBASIC20.03■□□□□ 0.8
AP4B1Q9Y6B7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.03■□□□□ 0.8
AP4B1Q9Y6B7 AFG3L1P-217ENST00000557444 2447 ntBASIC20.03■□□□□ 0.8
AP4B1Q9Y6B7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.03■□□□□ 0.8
AP4B1Q9Y6B7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP4B1Q9Y6B7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.03■□□□□ 0.8
AP4B1Q9Y6B7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
AP4B1Q9Y6B7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
AP4B1Q9Y6B7 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
AP4B1Q9Y6B7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
AP4B1Q9Y6B7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.03■□□□□ 0.8
AP4B1Q9Y6B7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
AP4B1Q9Y6B7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.02■□□□□ 0.8
AP4B1Q9Y6B7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.02■□□□□ 0.8
AP4B1Q9Y6B7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms