Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.35■□□□□ 0.85
PCDHGA11Q9Y5H2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA11Q9Y5H2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PCDHGA11Q9Y5H2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.35■□□□□ 0.85
PCDHGA11Q9Y5H2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA11Q9Y5H2 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA11Q9Y5H2 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 IRS3P-201ENST00000223076 1006 ntBASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 AC105265.2-201ENST00000467189 838 ntBASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.34■□□□□ 0.85
PCDHGA11Q9Y5H2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGA11Q9Y5H2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGA11Q9Y5H2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGA11Q9Y5H2 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGA11Q9Y5H2 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGA11Q9Y5H2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGA11Q9Y5H2 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.33■□□□□ 0.85
PCDHGA11Q9Y5H2 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PCDHGA11Q9Y5H2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.33■□□□□ 0.85
PCDHGA11Q9Y5H2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.33■□□□□ 0.85
PCDHGA11Q9Y5H2 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHGA11Q9Y5H2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
PCDHGA11Q9Y5H2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHGA11Q9Y5H2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.33■□□□□ 0.84
PCDHGA11Q9Y5H2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHGA11Q9Y5H2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.33■□□□□ 0.84
PCDHGA11Q9Y5H2 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHGA11Q9Y5H2 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PCDHGA11Q9Y5H2 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGA11Q9Y5H2 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PCDHGA11Q9Y5H2 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGA11Q9Y5H2 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGA11Q9Y5H2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.32■□□□□ 0.84
PCDHGA11Q9Y5H2 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHGA11Q9Y5H2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.32■□□□□ 0.84
PCDHGA11Q9Y5H2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHGA11Q9Y5H2 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHGA11Q9Y5H2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGA11Q9Y5H2 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PCDHGA11Q9Y5H2 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGA11Q9Y5H2 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHGA11Q9Y5H2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGA11Q9Y5H2 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.32■□□□□ 0.84
PCDHGA11Q9Y5H2 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PCDHGA11Q9Y5H2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDHGA11Q9Y5H2 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA11Q9Y5H2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.31■□□□□ 0.84
PCDHGA11Q9Y5H2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PCDHGA11Q9Y5H2 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA11Q9Y5H2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA11Q9Y5H2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA11Q9Y5H2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHGA11Q9Y5H2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA11Q9Y5H2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.31■□□□□ 0.84
PCDHGA11Q9Y5H2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.31■□□□□ 0.84
PCDHGA11Q9Y5H2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.31■□□□□ 0.84
PCDHGA11Q9Y5H2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.31■□□□□ 0.84
PCDHGA11Q9Y5H2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA11Q9Y5H2 TPRG1LP1-201ENST00000598702 760 ntBASIC20.31■□□□□ 0.84
PCDHGA11Q9Y5H2 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PCDHGA11Q9Y5H2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PCDHGA11Q9Y5H2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PCDHGA11Q9Y5H2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
PCDHGA11Q9Y5H2 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.3■□□□□ 0.84
PCDHGA11Q9Y5H2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms