Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB9Q9Y5E1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB9Q9Y5E1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHB9Q9Y5E1 EEF1DP3-203ENST00000566025 782 ntBASIC21.36■■□□□ 1.01
PCDHB9Q9Y5E1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHB9Q9Y5E1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB9Q9Y5E1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDHB9Q9Y5E1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB9Q9Y5E1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB9Q9Y5E1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB9Q9Y5E1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB9Q9Y5E1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDHB9Q9Y5E1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
PCDHB9Q9Y5E1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB9Q9Y5E1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB9Q9Y5E1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHB9Q9Y5E1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.35■■□□□ 1.01
PCDHB9Q9Y5E1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.35■■□□□ 1.01
PCDHB9Q9Y5E1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB9Q9Y5E1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.35■■□□□ 1.01
PCDHB9Q9Y5E1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB9Q9Y5E1 AC053503.5-201ENST00000601508 636 ntBASIC21.35■■□□□ 1.01
PCDHB9Q9Y5E1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PCDHB9Q9Y5E1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDHB9Q9Y5E1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB9Q9Y5E1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB9Q9Y5E1 LINC00565-201ENST00000562710 2331 ntBASIC21.34■■□□□ 1.01
PCDHB9Q9Y5E1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDHB9Q9Y5E1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB9Q9Y5E1 AC083906.2-201ENST00000511578 360 ntBASIC21.34■■□□□ 1.01
PCDHB9Q9Y5E1 KRT18P6-201ENST00000555540 1265 ntBASIC21.34■■□□□ 1.01
PCDHB9Q9Y5E1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.34■■□□□ 1.01
PCDHB9Q9Y5E1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.34■■□□□ 1.01
PCDHB9Q9Y5E1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
PCDHB9Q9Y5E1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB9Q9Y5E1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
PCDHB9Q9Y5E1 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB9Q9Y5E1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB9Q9Y5E1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB9Q9Y5E1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCDHB9Q9Y5E1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.34■■□□□ 1.01
PCDHB9Q9Y5E1 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
PCDHB9Q9Y5E1 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHB9Q9Y5E1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
PCDHB9Q9Y5E1 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHB9Q9Y5E1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.33■■□□□ 1.01
PCDHB9Q9Y5E1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCDHB9Q9Y5E1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.33■■□□□ 1
PCDHB9Q9Y5E1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.33■■□□□ 1
PCDHB9Q9Y5E1 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.33■■□□□ 1
PCDHB9Q9Y5E1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
PCDHB9Q9Y5E1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
PCDHB9Q9Y5E1 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHB9Q9Y5E1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHB9Q9Y5E1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHB9Q9Y5E1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHB9Q9Y5E1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHB9Q9Y5E1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.32■■□□□ 1
PCDHB9Q9Y5E1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHB9Q9Y5E1 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.32■■□□□ 1
PCDHB9Q9Y5E1 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDHB9Q9Y5E1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.32■■□□□ 1
PCDHB9Q9Y5E1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.32■■□□□ 1
PCDHB9Q9Y5E1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDHB9Q9Y5E1 AC142086.2-201ENST00000569753 217 ntBASIC21.32■■□□□ 1
PCDHB9Q9Y5E1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHB9Q9Y5E1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCDHB9Q9Y5E1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.32■■□□□ 1
PCDHB9Q9Y5E1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHB9Q9Y5E1 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCDHB9Q9Y5E1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
PCDHB9Q9Y5E1 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.32■■□□□ 1
PCDHB9Q9Y5E1 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHB9Q9Y5E1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
PCDHB9Q9Y5E1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHB9Q9Y5E1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHB9Q9Y5E1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHB9Q9Y5E1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDHB9Q9Y5E1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
PCDHB9Q9Y5E1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.31■■□□□ 1
PCDHB9Q9Y5E1 SLC29A4P1-201ENST00000398760 971 ntBASIC21.31■■□□□ 1
PCDHB9Q9Y5E1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.31■■□□□ 1
PCDHB9Q9Y5E1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.31■■□□□ 1
PCDHB9Q9Y5E1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.31■■□□□ 1
PCDHB9Q9Y5E1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHB9Q9Y5E1 AC231657.2-201ENST00000624556 255 ntBASIC21.31■■□□□ 1
PCDHB9Q9Y5E1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHB9Q9Y5E1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHB9Q9Y5E1 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHB9Q9Y5E1 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHB9Q9Y5E1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PCDHB9Q9Y5E1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDHB9Q9Y5E1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.3■■□□□ 1
PCDHB9Q9Y5E1 FAM201B-201ENST00000458407 597 ntBASIC21.3■■□□□ 1
PCDHB9Q9Y5E1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.3■■□□□ 1
PCDHB9Q9Y5E1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.3■■□□□ 1
PCDHB9Q9Y5E1 AC138907.5-202ENST00000569484 235 ntBASIC21.3■■□□□ 1
PCDHB9Q9Y5E1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
PCDHB9Q9Y5E1 AP001160.3-201ENST00000601484 763 ntBASIC21.3■■□□□ 1
PCDHB9Q9Y5E1 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms