Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APOBEC3BQ9UH17 AC133041.1-202ENST00000642053 222 ntBASIC20.67■□□□□ 0.9
APOBEC3BQ9UH17 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.67■□□□□ 0.9
APOBEC3BQ9UH17 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.67■□□□□ 0.9
APOBEC3BQ9UH17 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.67■□□□□ 0.9
APOBEC3BQ9UH17 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APOBEC3BQ9UH17 MKRN4P-201ENST00000444706 1521 ntBASIC20.67■□□□□ 0.9
APOBEC3BQ9UH17 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APOBEC3BQ9UH17 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APOBEC3BQ9UH17 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APOBEC3BQ9UH17 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOBEC3BQ9UH17 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
APOBEC3BQ9UH17 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APOBEC3BQ9UH17 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
APOBEC3BQ9UH17 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOBEC3BQ9UH17 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APOBEC3BQ9UH17 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.66■□□□□ 0.9
APOBEC3BQ9UH17 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.66■□□□□ 0.9
APOBEC3BQ9UH17 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
APOBEC3BQ9UH17 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
APOBEC3BQ9UH17 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.66■□□□□ 0.9
APOBEC3BQ9UH17 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOBEC3BQ9UH17 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOBEC3BQ9UH17 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOBEC3BQ9UH17 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.66■□□□□ 0.9
APOBEC3BQ9UH17 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
APOBEC3BQ9UH17 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.66■□□□□ 0.9
APOBEC3BQ9UH17 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APOBEC3BQ9UH17 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOBEC3BQ9UH17 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
APOBEC3BQ9UH17 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOBEC3BQ9UH17 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOBEC3BQ9UH17 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
APOBEC3BQ9UH17 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.65■□□□□ 0.9
APOBEC3BQ9UH17 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
APOBEC3BQ9UH17 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APOBEC3BQ9UH17 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
APOBEC3BQ9UH17 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.65■□□□□ 0.9
APOBEC3BQ9UH17 RBM17P2-201ENST00000616397 1405 ntBASIC20.65■□□□□ 0.9
APOBEC3BQ9UH17 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
APOBEC3BQ9UH17 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.65■□□□□ 0.9
APOBEC3BQ9UH17 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
APOBEC3BQ9UH17 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
APOBEC3BQ9UH17 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.65■□□□□ 0.9
APOBEC3BQ9UH17 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
APOBEC3BQ9UH17 AC098934.4-201ENST00000564127 592 ntBASIC20.65■□□□□ 0.9
APOBEC3BQ9UH17 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
APOBEC3BQ9UH17 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
APOBEC3BQ9UH17 AC016405.3-201ENST00000607710 860 ntBASIC20.65■□□□□ 0.9
APOBEC3BQ9UH17 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.65■□□□□ 0.9
APOBEC3BQ9UH17 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.65■□□□□ 0.9
APOBEC3BQ9UH17 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APOBEC3BQ9UH17 AL117328.2-201ENST00000624617 1940 ntBASIC20.65■□□□□ 0.9
APOBEC3BQ9UH17 AC242852.2-201ENST00000615738 1807 ntBASIC20.64■□□□□ 0.9
APOBEC3BQ9UH17 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
APOBEC3BQ9UH17 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
APOBEC3BQ9UH17 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
APOBEC3BQ9UH17 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.64■□□□□ 0.89
APOBEC3BQ9UH17 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
APOBEC3BQ9UH17 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
APOBEC3BQ9UH17 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
APOBEC3BQ9UH17 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
APOBEC3BQ9UH17 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.63■□□□□ 0.89
APOBEC3BQ9UH17 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
APOBEC3BQ9UH17 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
APOBEC3BQ9UH17 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
APOBEC3BQ9UH17 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
APOBEC3BQ9UH17 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
APOBEC3BQ9UH17 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
APOBEC3BQ9UH17 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.63■□□□□ 0.89
APOBEC3BQ9UH17 AC073210.2-201ENST00000430369 194 ntBASIC20.63■□□□□ 0.89
APOBEC3BQ9UH17 AC093787.1-201ENST00000450396 207 ntBASIC20.63■□□□□ 0.89
APOBEC3BQ9UH17 MIR4758-201ENST00000577688 71 ntBASIC20.63■□□□□ 0.89
APOBEC3BQ9UH17 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
APOBEC3BQ9UH17 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
APOBEC3BQ9UH17 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.63■□□□□ 0.89
APOBEC3BQ9UH17 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
APOBEC3BQ9UH17 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
APOBEC3BQ9UH17 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
APOBEC3BQ9UH17 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
APOBEC3BQ9UH17 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
APOBEC3BQ9UH17 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
APOBEC3BQ9UH17 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.62■□□□□ 0.89
APOBEC3BQ9UH17 ECEL1P1-201ENST00000373592 1742 ntBASIC20.62■□□□□ 0.89
APOBEC3BQ9UH17 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
APOBEC3BQ9UH17 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
APOBEC3BQ9UH17 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
APOBEC3BQ9UH17 MIPEPP3-201ENST00000412105 444 ntBASIC20.62■□□□□ 0.89
APOBEC3BQ9UH17 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
APOBEC3BQ9UH17 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.61■□□□□ 0.89
APOBEC3BQ9UH17 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.61■□□□□ 0.89
APOBEC3BQ9UH17 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.61■□□□□ 0.89
APOBEC3BQ9UH17 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.61■□□□□ 0.89
APOBEC3BQ9UH17 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
APOBEC3BQ9UH17 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.61■□□□□ 0.89
APOBEC3BQ9UH17 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
APOBEC3BQ9UH17 AL591742.1-201ENST00000604433 565 ntBASIC20.61■□□□□ 0.89
APOBEC3BQ9UH17 AC243732.1-201ENST00000612648 864 ntBASIC20.61■□□□□ 0.89
APOBEC3BQ9UH17 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.61■□□□□ 0.89
APOBEC3BQ9UH17 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms