Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.08■□□□□ 0.97
CPSF2Q9P2I0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.08■□□□□ 0.97
CPSF2Q9P2I0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.08■□□□□ 0.97
CPSF2Q9P2I0 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CPSF2Q9P2I0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CPSF2Q9P2I0 OXCT2P1-201ENST00000447263 1535 ntBASIC21.08■□□□□ 0.96
CPSF2Q9P2I0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
CPSF2Q9P2I0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.08■□□□□ 0.96
CPSF2Q9P2I0 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPSF2Q9P2I0 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.07■□□□□ 0.96
CPSF2Q9P2I0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CPSF2Q9P2I0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CPSF2Q9P2I0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.07■□□□□ 0.96
CPSF2Q9P2I0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPSF2Q9P2I0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CPSF2Q9P2I0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPSF2Q9P2I0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CPSF2Q9P2I0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPSF2Q9P2I0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.07■□□□□ 0.96
CPSF2Q9P2I0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPSF2Q9P2I0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CPSF2Q9P2I0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CPSF2Q9P2I0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPSF2Q9P2I0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CPSF2Q9P2I0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CPSF2Q9P2I0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.06■□□□□ 0.96
CPSF2Q9P2I0 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.06■□□□□ 0.96
CPSF2Q9P2I0 DUX4L19-201ENST00000557448 1267 ntBASIC21.06■□□□□ 0.96
CPSF2Q9P2I0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CPSF2Q9P2I0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CPSF2Q9P2I0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
CPSF2Q9P2I0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.06■□□□□ 0.96
CPSF2Q9P2I0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPSF2Q9P2I0 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPSF2Q9P2I0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPSF2Q9P2I0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.05■□□□□ 0.96
CPSF2Q9P2I0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CPSF2Q9P2I0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPSF2Q9P2I0 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC21.05■□□□□ 0.96
CPSF2Q9P2I0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CPSF2Q9P2I0 AC131281.2-201ENST00000520478 145 ntBASIC21.05■□□□□ 0.96
CPSF2Q9P2I0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.05■□□□□ 0.96
CPSF2Q9P2I0 AL138724.1-201ENST00000606771 1088 ntBASIC21.05■□□□□ 0.96
CPSF2Q9P2I0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPSF2Q9P2I0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPSF2Q9P2I0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.05■□□□□ 0.96
CPSF2Q9P2I0 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CPSF2Q9P2I0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPSF2Q9P2I0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CPSF2Q9P2I0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPSF2Q9P2I0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPSF2Q9P2I0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CPSF2Q9P2I0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CPSF2Q9P2I0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CPSF2Q9P2I0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CPSF2Q9P2I0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPSF2Q9P2I0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.04■□□□□ 0.96
CPSF2Q9P2I0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CPSF2Q9P2I0 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
CPSF2Q9P2I0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CPSF2Q9P2I0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.04■□□□□ 0.96
CPSF2Q9P2I0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPSF2Q9P2I0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CPSF2Q9P2I0 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CPSF2Q9P2I0 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC21.04■□□□□ 0.96
CPSF2Q9P2I0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CPSF2Q9P2I0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CPSF2Q9P2I0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPSF2Q9P2I0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.03■□□□□ 0.96
CPSF2Q9P2I0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPSF2Q9P2I0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CPSF2Q9P2I0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPSF2Q9P2I0 SLC47A1P1-202ENST00000449666 945 ntBASIC21.03■□□□□ 0.96
CPSF2Q9P2I0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.03■□□□□ 0.96
CPSF2Q9P2I0 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CPSF2Q9P2I0 AC136469.2-201ENST00000623944 1028 ntBASIC21.03■□□□□ 0.96
CPSF2Q9P2I0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.03■□□□□ 0.96
CPSF2Q9P2I0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.03■□□□□ 0.96
CPSF2Q9P2I0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPSF2Q9P2I0 AL157384.1-201ENST00000445995 2473 ntBASIC21.03■□□□□ 0.96
CPSF2Q9P2I0 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPSF2Q9P2I0 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CPSF2Q9P2I0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
CPSF2Q9P2I0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CPSF2Q9P2I0 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPSF2Q9P2I0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CPSF2Q9P2I0 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
CPSF2Q9P2I0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.03■□□□□ 0.96
CPSF2Q9P2I0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CPSF2Q9P2I0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPSF2Q9P2I0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CPSF2Q9P2I0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPSF2Q9P2I0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPSF2Q9P2I0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.02■□□□□ 0.96
CPSF2Q9P2I0 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPSF2Q9P2I0 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.02■□□□□ 0.96
CPSF2Q9P2I0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.02■□□□□ 0.96
CPSF2Q9P2I0 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
CPSF2Q9P2I0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CPSF2Q9P2I0 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms