Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SPHK1Q9NYA1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
SPHK1Q9NYA1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPHK1Q9NYA1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPHK1Q9NYA1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPHK1Q9NYA1 POU5F1P4-201ENST00000413175 1085 ntBASIC20.3■□□□□ 0.84
SPHK1Q9NYA1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.3■□□□□ 0.84
SPHK1Q9NYA1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
SPHK1Q9NYA1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SPHK1Q9NYA1 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SPHK1Q9NYA1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SPHK1Q9NYA1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.3■□□□□ 0.84
SPHK1Q9NYA1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SPHK1Q9NYA1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.3■□□□□ 0.84
SPHK1Q9NYA1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SPHK1Q9NYA1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.3■□□□□ 0.84
SPHK1Q9NYA1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPHK1Q9NYA1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SPHK1Q9NYA1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPHK1Q9NYA1 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPHK1Q9NYA1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SPHK1Q9NYA1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPHK1Q9NYA1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPHK1Q9NYA1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SPHK1Q9NYA1 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SPHK1Q9NYA1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SPHK1Q9NYA1 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPHK1Q9NYA1 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.29■□□□□ 0.84
SPHK1Q9NYA1 LINC00565-201ENST00000562710 2331 ntBASIC20.29■□□□□ 0.84
SPHK1Q9NYA1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPHK1Q9NYA1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPHK1Q9NYA1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPHK1Q9NYA1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.29■□□□□ 0.84
SPHK1Q9NYA1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPHK1Q9NYA1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPHK1Q9NYA1 AC073111.5-205ENST00000641717 521 ntBASIC20.29■□□□□ 0.84
SPHK1Q9NYA1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPHK1Q9NYA1 AC079834.2-201ENST00000609776 1949 ntBASIC20.29■□□□□ 0.84
SPHK1Q9NYA1 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPHK1Q9NYA1 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPHK1Q9NYA1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPHK1Q9NYA1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPHK1Q9NYA1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SPHK1Q9NYA1 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPHK1Q9NYA1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SPHK1Q9NYA1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SPHK1Q9NYA1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.28■□□□□ 0.84
SPHK1Q9NYA1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.28■□□□□ 0.84
SPHK1Q9NYA1 CDCA4P2-201ENST00000441182 718 ntBASIC20.28■□□□□ 0.84
SPHK1Q9NYA1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SPHK1Q9NYA1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.28■□□□□ 0.84
SPHK1Q9NYA1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SPHK1Q9NYA1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPHK1Q9NYA1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
SPHK1Q9NYA1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SPHK1Q9NYA1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.28■□□□□ 0.84
SPHK1Q9NYA1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPHK1Q9NYA1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPHK1Q9NYA1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.28■□□□□ 0.84
SPHK1Q9NYA1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SPHK1Q9NYA1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPHK1Q9NYA1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPHK1Q9NYA1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.27■□□□□ 0.84
SPHK1Q9NYA1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.27■□□□□ 0.84
SPHK1Q9NYA1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.27■□□□□ 0.84
SPHK1Q9NYA1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.27■□□□□ 0.84
SPHK1Q9NYA1 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SPHK1Q9NYA1 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.27■□□□□ 0.84
SPHK1Q9NYA1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPHK1Q9NYA1 AC090192.1-201ENST00000517740 490 ntBASIC20.27■□□□□ 0.84
SPHK1Q9NYA1 AC120498.10-201ENST00000621827 505 ntBASIC20.27■□□□□ 0.84
SPHK1Q9NYA1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SPHK1Q9NYA1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SPHK1Q9NYA1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
SPHK1Q9NYA1 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SPHK1Q9NYA1 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SPHK1Q9NYA1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
SPHK1Q9NYA1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
SPHK1Q9NYA1 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.26■□□□□ 0.83
SPHK1Q9NYA1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPHK1Q9NYA1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.26■□□□□ 0.83
SPHK1Q9NYA1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SPHK1Q9NYA1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPHK1Q9NYA1 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPHK1Q9NYA1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.26■□□□□ 0.83
SPHK1Q9NYA1 DUX4L16-201ENST00000555130 1264 ntBASIC20.26■□□□□ 0.83
SPHK1Q9NYA1 SLC7A5P1-201ENST00000568957 537 ntBASIC20.26■□□□□ 0.83
SPHK1Q9NYA1 RAP2CP1-201ENST00000605103 478 ntBASIC20.26■□□□□ 0.83
SPHK1Q9NYA1 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPHK1Q9NYA1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.26■□□□□ 0.83
SPHK1Q9NYA1 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPHK1Q9NYA1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SPHK1Q9NYA1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPHK1Q9NYA1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPHK1Q9NYA1 AC244015.2-201ENST00000616358 1861 ntBASIC20.26■□□□□ 0.83
SPHK1Q9NYA1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPHK1Q9NYA1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.25■□□□□ 0.83
SPHK1Q9NYA1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SPHK1Q9NYA1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPHK1Q9NYA1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms