Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NDE1Q9NXR1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.3■□□□□ 0.84
NDE1Q9NXR1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
NDE1Q9NXR1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
NDE1Q9NXR1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.29■□□□□ 0.84
NDE1Q9NXR1 PCDHAC2-203ENST00000615316 3011 ntBASIC20.29■□□□□ 0.84
NDE1Q9NXR1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
NDE1Q9NXR1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NDE1Q9NXR1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NDE1Q9NXR1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NDE1Q9NXR1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.29■□□□□ 0.84
NDE1Q9NXR1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.29■□□□□ 0.84
NDE1Q9NXR1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.29■□□□□ 0.84
NDE1Q9NXR1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NDE1Q9NXR1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NDE1Q9NXR1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
NDE1Q9NXR1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NDE1Q9NXR1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NDE1Q9NXR1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NDE1Q9NXR1 AC006128.1-201ENST00000624704 1661 ntBASIC20.29■□□□□ 0.84
NDE1Q9NXR1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 NTF6A-201ENST00000591175 560 ntBASIC20.28■□□□□ 0.84
NDE1Q9NXR1 AC068587.7-201ENST00000641602 218 ntBASIC20.28■□□□□ 0.84
NDE1Q9NXR1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.27■□□□□ 0.84
NDE1Q9NXR1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NDE1Q9NXR1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.27■□□□□ 0.84
NDE1Q9NXR1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NDE1Q9NXR1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NDE1Q9NXR1 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.27■□□□□ 0.84
NDE1Q9NXR1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NDE1Q9NXR1 ATP5G2P3-201ENST00000429083 425 ntBASIC20.27■□□□□ 0.84
NDE1Q9NXR1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NDE1Q9NXR1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.27■□□□□ 0.84
NDE1Q9NXR1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
NDE1Q9NXR1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NDE1Q9NXR1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NDE1Q9NXR1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NDE1Q9NXR1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.27■□□□□ 0.83
NDE1Q9NXR1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.27■□□□□ 0.83
NDE1Q9NXR1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.27■□□□□ 0.83
NDE1Q9NXR1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NDE1Q9NXR1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
NDE1Q9NXR1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
NDE1Q9NXR1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 AL034346.1-201ENST00000568244 1277 ntBASIC20.26■□□□□ 0.83
NDE1Q9NXR1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NDE1Q9NXR1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NDE1Q9NXR1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.25■□□□□ 0.83
NDE1Q9NXR1 AC021242.3-201ENST00000607598 1377 ntBASIC20.25■□□□□ 0.83
NDE1Q9NXR1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
NDE1Q9NXR1 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
NDE1Q9NXR1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NDE1Q9NXR1 AC004987.1-201ENST00000428627 508 ntBASIC20.25■□□□□ 0.83
NDE1Q9NXR1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
NDE1Q9NXR1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.25■□□□□ 0.83
NDE1Q9NXR1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
NDE1Q9NXR1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.25■□□□□ 0.83
NDE1Q9NXR1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
NDE1Q9NXR1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NDE1Q9NXR1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms