Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NDE1Q9NXR1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.3■□□□□ 0.84
NDE1Q9NXR1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
NDE1Q9NXR1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
NDE1Q9NXR1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.29■□□□□ 0.84
NDE1Q9NXR1 PCDHAC2-203ENST00000615316 3011 ntBASIC20.29■□□□□ 0.84
NDE1Q9NXR1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
NDE1Q9NXR1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NDE1Q9NXR1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NDE1Q9NXR1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NDE1Q9NXR1 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.29■□□□□ 0.84
NDE1Q9NXR1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.29■□□□□ 0.84
NDE1Q9NXR1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.29■□□□□ 0.84
NDE1Q9NXR1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NDE1Q9NXR1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NDE1Q9NXR1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
NDE1Q9NXR1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NDE1Q9NXR1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NDE1Q9NXR1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NDE1Q9NXR1 AC006128.1-201ENST00000624704 1661 ntBASIC20.29■□□□□ 0.84
NDE1Q9NXR1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 NTF6A-201ENST00000591175 560 ntBASIC20.28■□□□□ 0.84
NDE1Q9NXR1 AC068587.7-201ENST00000641602 218 ntBASIC20.28■□□□□ 0.84
NDE1Q9NXR1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDE1Q9NXR1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.27■□□□□ 0.84
NDE1Q9NXR1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NDE1Q9NXR1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.27■□□□□ 0.84
NDE1Q9NXR1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NDE1Q9NXR1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NDE1Q9NXR1 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.27■□□□□ 0.84
NDE1Q9NXR1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NDE1Q9NXR1 ATP5G2P3-201ENST00000429083 425 ntBASIC20.27■□□□□ 0.84
NDE1Q9NXR1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NDE1Q9NXR1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.27■□□□□ 0.84
NDE1Q9NXR1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
NDE1Q9NXR1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NDE1Q9NXR1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NDE1Q9NXR1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NDE1Q9NXR1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.27■□□□□ 0.83
NDE1Q9NXR1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.27■□□□□ 0.83
NDE1Q9NXR1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.27■□□□□ 0.83
NDE1Q9NXR1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NDE1Q9NXR1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
NDE1Q9NXR1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
NDE1Q9NXR1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 AL034346.1-201ENST00000568244 1277 ntBASIC20.26■□□□□ 0.83
NDE1Q9NXR1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
NDE1Q9NXR1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NDE1Q9NXR1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NDE1Q9NXR1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.25■□□□□ 0.83
NDE1Q9NXR1 AC021242.3-201ENST00000607598 1377 ntBASIC20.25■□□□□ 0.83
NDE1Q9NXR1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
NDE1Q9NXR1 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
NDE1Q9NXR1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NDE1Q9NXR1 AC004987.1-201ENST00000428627 508 ntBASIC20.25■□□□□ 0.83
NDE1Q9NXR1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
NDE1Q9NXR1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.25■□□□□ 0.83
NDE1Q9NXR1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
NDE1Q9NXR1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.25■□□□□ 0.83
NDE1Q9NXR1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
NDE1Q9NXR1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NDE1Q9NXR1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms