Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.34■□□□□ 0.85
CUEDC1Q9NWM3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.34■□□□□ 0.85
CUEDC1Q9NWM3 AC053503.5-201ENST00000601508 636 ntBASIC20.34■□□□□ 0.85
CUEDC1Q9NWM3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
CUEDC1Q9NWM3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.34■□□□□ 0.85
CUEDC1Q9NWM3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CUEDC1Q9NWM3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CUEDC1Q9NWM3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CUEDC1Q9NWM3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
CUEDC1Q9NWM3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CUEDC1Q9NWM3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CUEDC1Q9NWM3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CUEDC1Q9NWM3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CUEDC1Q9NWM3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CUEDC1Q9NWM3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CUEDC1Q9NWM3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CUEDC1Q9NWM3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CUEDC1Q9NWM3 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.33■□□□□ 0.85
CUEDC1Q9NWM3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
CUEDC1Q9NWM3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CUEDC1Q9NWM3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.33■□□□□ 0.84
CUEDC1Q9NWM3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CUEDC1Q9NWM3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.33■□□□□ 0.84
CUEDC1Q9NWM3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.33■□□□□ 0.84
CUEDC1Q9NWM3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CUEDC1Q9NWM3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CUEDC1Q9NWM3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CUEDC1Q9NWM3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CUEDC1Q9NWM3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CUEDC1Q9NWM3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.32■□□□□ 0.84
CUEDC1Q9NWM3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.32■□□□□ 0.84
CUEDC1Q9NWM3 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.32■□□□□ 0.84
CUEDC1Q9NWM3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CUEDC1Q9NWM3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CUEDC1Q9NWM3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CUEDC1Q9NWM3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CUEDC1Q9NWM3 Z98882.1-201ENST00000622160 2253 ntBASIC20.32■□□□□ 0.84
CUEDC1Q9NWM3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.31■□□□□ 0.84
CUEDC1Q9NWM3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.31■□□□□ 0.84
CUEDC1Q9NWM3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CUEDC1Q9NWM3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CUEDC1Q9NWM3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CUEDC1Q9NWM3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CUEDC1Q9NWM3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CUEDC1Q9NWM3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CUEDC1Q9NWM3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CUEDC1Q9NWM3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.31■□□□□ 0.84
CUEDC1Q9NWM3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.31■□□□□ 0.84
CUEDC1Q9NWM3 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.31■□□□□ 0.84
CUEDC1Q9NWM3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CUEDC1Q9NWM3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CUEDC1Q9NWM3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.31■□□□□ 0.84
CUEDC1Q9NWM3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CUEDC1Q9NWM3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CUEDC1Q9NWM3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.3■□□□□ 0.84
CUEDC1Q9NWM3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CUEDC1Q9NWM3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.3■□□□□ 0.84
CUEDC1Q9NWM3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CUEDC1Q9NWM3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
CUEDC1Q9NWM3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CUEDC1Q9NWM3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CUEDC1Q9NWM3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.3■□□□□ 0.84
CUEDC1Q9NWM3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.3■□□□□ 0.84
CUEDC1Q9NWM3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.3■□□□□ 0.84
CUEDC1Q9NWM3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CUEDC1Q9NWM3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CUEDC1Q9NWM3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CUEDC1Q9NWM3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.3■□□□□ 0.84
CUEDC1Q9NWM3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.3■□□□□ 0.84
CUEDC1Q9NWM3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CUEDC1Q9NWM3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CUEDC1Q9NWM3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CUEDC1Q9NWM3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CUEDC1Q9NWM3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.3■□□□□ 0.84
CUEDC1Q9NWM3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.29■□□□□ 0.84
CUEDC1Q9NWM3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.29■□□□□ 0.84
CUEDC1Q9NWM3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CUEDC1Q9NWM3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CUEDC1Q9NWM3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CUEDC1Q9NWM3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CUEDC1Q9NWM3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CUEDC1Q9NWM3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.29■□□□□ 0.84
CUEDC1Q9NWM3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.29■□□□□ 0.84
CUEDC1Q9NWM3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.29■□□□□ 0.84
CUEDC1Q9NWM3 AC138907.5-202ENST00000569484 235 ntBASIC20.29■□□□□ 0.84
CUEDC1Q9NWM3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CUEDC1Q9NWM3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.29■□□□□ 0.84
CUEDC1Q9NWM3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CUEDC1Q9NWM3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.28■□□□□ 0.84
CUEDC1Q9NWM3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CUEDC1Q9NWM3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CUEDC1Q9NWM3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.28■□□□□ 0.84
CUEDC1Q9NWM3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CUEDC1Q9NWM3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CUEDC1Q9NWM3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CUEDC1Q9NWM3 AC010141.2-201ENST00000452426 721 ntBASIC20.28■□□□□ 0.84
CUEDC1Q9NWM3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CUEDC1Q9NWM3 AP001160.3-201ENST00000601484 763 ntBASIC20.28■□□□□ 0.84
CUEDC1Q9NWM3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CUEDC1Q9NWM3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms